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Eurosurveillance

77 training papers 2019-06-25 – 2026-03-07

Top medRxiv preprints most likely to be published in this journal, ranked by match strength.

1
Changes In Incidence And Serotype Distribution Of Pediat-Ric Invasive Pneumococcal Disease After The Introduction Of 15-Valent Pneumococcal Conjugate Vaccine In Catalo-Nia, Spain. A Multicenter Surveillance Study
2026-02-12 epidemiology 10.64898/2026.02.11.26346066
Top 0.1% (7.6%)
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BackgroundSerotype 3 (S3) has remained a major cause of invasive pneumococcal disease (IPD) despite its inclusion in 13-valent pneumococcal conjugate vaccine (PCV). In October 2023, a 15-valent PCV (PCV15) including S3 was introduced into the Catalan universal childhood immunization program. MethodsWe conducted a retrospective pre-post surveillance study to compare pediatric IPD incidence in Catalonia during a pre-PCV15 period (October 1, 2022-September 30, 2023) and two post-PCV15 periods (Oct...

2
COVID-19 hospitalizations in the Netherlands, 2023-2024: disease burden and vaccine effectiveness
2026-02-16 epidemiology 10.64898/2026.02.12.26346177
Top 0.2% (6.2%)
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Since the cessation of real-time monitoring of COVID-19 hospitalizations in early 2024, the burden of and vaccine effectiveness (VE) against severe COVID-19 in the Netherlands was largely unknown. Recently, hospitalization data from 2024 were made available for the purpose of monitoring and evaluating the COVID-19 vaccination campaigns. These data were linked to the population registry, vaccination registry and healthcare use data (for classification into medical risk groups). We analyzed the n...

3
Assessing the impact of the COVID-19 pandemic on routine childhood vaccination uptake in the Netherlands
2026-02-20 epidemiology 10.64898/2026.02.19.26346601
Top 0.6% (5.1%)
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BackgroundInitial reports from the Netherlands indicate a decline in routine childhood vaccination uptake during and after the COVID-19 pandemic, with emerging evidence of reduced parental vaccine confidence. This study aimed to evaluate the long-term impact of the COVID-19 pandemic on routine childhood vaccination uptake. MethodsWe conducted a retrospective nationwide cohort study including all children born in the Netherlands in 2016-2024. First-dose DTaP-IPV vaccination status by age six mon...

4
Automated outbreak detection systems in the EU: Requirements and challenges for its implementation, 2023/2024
2026-03-02 epidemiology 10.64898/2026.02.20.26346630
Top 0.8% (4.7%)
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Automated outbreak detection can enhance infectious disease surveillance by enabling early identification of outbreaks and supporting timely public health measures. However, information on its current use by national public health institutes (NPHI) remains limited. This paper provides an updated and extended overview of automated outbreak detection usage in the European Union (EU) and United Kingdom (UK). Key findings were gathered through the Joint Action United4Surveillance via an online surve...

5
Clinical and virological characteristics of critically ill patients with influenza in France during the 2025/26 season, marked by the emergence of influenza A(H3N2) clade K
2026-02-28 intensive care and critical care medicine 10.64898/2026.02.20.26346693
Top 1% (4.0%)
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ImportanceRecent reports have highlighted an intense influenza activity related to the circulation of the influenza A(H3N2) subclade k variant. There is no data available on the impact of the emergence of H3N2 subclade k on the severity of the 2025-2026 epidemic or on the clinical phenotype of patients requiring admission to the intensive care unit (ICU). ObjectiveTo compare the clinical presentation, hospital mortality and virological characteristics of patients with laboratory-confirmed influ...

6
Genomic Epidemiology and Emerging Mechanisms of Antibiotic Resistance Among Clinically Significant Bacteria
2026-02-20 epidemiology 10.64898/2026.02.17.26346381
Top 1% (3.9%)
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BackgroundThe never-ending emergence of superbugs casts a shadow over the victorious age of antibiotics. In fact, the triumph of antibiotics was previously viewed in retrospection as our final victory over bacteria. Bacteria like Klebsiella pneumoniae, Acinetobacter baumannii, and Escherichia coli are now raising an alarming number of infections across hospitals and communities around the globe. The objective was to evaluate the implications for antimicrobial stewardship based on identifying the...

7
An emerging trend in STI Management: Antibiotic STI Post-Exposure Prophylaxis Prevalence and Determinants in Recent Surveys
2026-02-09 epidemiology 10.64898/2026.02.06.26345737
Top 1% (3.6%)
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ObjectivesThis study aimed to estimate the prevalence of antibiotic post-exposure prophylaxis (STI PEP) use among gay, bisexual and other men who have sex with men (GBMSM) in England, and to identify demographic and behavioural factors associated with STI PEP use among early adopters. MethodsWe synthesised individual-level data from nine surveys conducted between 2019 and 2024. To harmonise variables that differed subtly across surveys, we generated composite indicators for STI diagnosis, chems...

8
The Prevalence, Risk Factors, and Antimicrobial Resistance of Campylobacter in African Children: A Systematic Review and Meta-Analysis
2026-02-10 epidemiology 10.64898/2026.02.09.26345948
Top 1% (3.6%)
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BackgroundCampylobacter is a major cause of childhood diarrhoea across Africa and asymptomatic carriage is frequently reported, however risk factors for Campylobacter presence remain poorly defined. This meta-analysis aimed to calculate the pooled prevalence of Campylobacter in diarrhoeic and non-diarrhoeic stool, assess its association with diarrhoea, identify risk factors for Campylobacter presence and antimicrobial resistance (AMR) patterns. MethodEnglish language studies on Campylobacter in...

9
Measles, Rubella, and Mumps in Mexico: A National Serosurvey Highlighting Reemergence Risks
2026-02-23 epidemiology 10.64898/2026.02.19.26346647
Top 2% (3.5%)
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ObjectivesDespite the availability of effective vaccines, achieving the seroprevalence thresholds recommended by the World Health Organization (WHO) for eliminating measles, rubella, and mumps remains a public health challenge. MethodsA retrospective, cross-sectional serological survey was conducted, including 9,587 serum samples collected from 31 of the 32 federal entities of Mexico between September and December 2024. IgG antibody levels against measles, rubella, and mumps were quantified usi...

10
Multicentre validation and update of a Legionella prediction score to guide testing and treatment in community-acquired pneumonia
2026-02-27 infectious diseases 10.64898/2026.02.25.26347092
Top 2% (3.4%)
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ObjectivesDiagnosis of community-acquired Legionnaires disease (CALD) relies on microbiological testing. Routine testing in hospitalised CAP patients has low positivity rates. We externally validated a Legionella prediction score, assessed its applicability in routine care, and explored potential updates. MethodsWe analysed data from 196 CALD patients from 20 Swiss hospitals and 196 Legionella-negative CAP controls matched by date of diagnosis ({+/-}14 days; August 2022-March 2024). We assessed...

11
Outburst of serotype 4 IPD after COVID-19 is driven by ST15063/GPSC162 lineage associated with high-risk behaviors and greater virulence linked to influenza H3N2 virus coinfection and cigarette smoke
2026-03-04 infectious diseases 10.64898/2026.02.27.26346872
Top 2% (3.3%)
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The emergence of vaccine covered serotypes causing invasive pneumococcal disease (IPD) is a serious concern worldwide. We investigated the unexpected rise of serotype 4 causing IPD primarily in non-vaccinated young adults after the COVID-19 pandemic that further spread to adults [≥] 65 years in recent years. For this purpose, we conducted a retrospective study of serotype 4 IPD cases (n=827) reported in Spain between 2009 and 2024. Whole-genome sequencing was performed to assess clonal lineag...

12
Modelling the impact of long-acting monoclonal antibody, maternal vaccine and hybrid programs of RSV immunisation in temperate Western Australia
2026-03-04 epidemiology 10.64898/2026.03.02.26347477
Top 2% (2.7%)
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BackgroundTwo RSV immunisations products: a maternal vaccine, Abrysvo, and a long-acting monoclonal antibody, nirsevimab, both designed to prevent RSV illness in infants, have recently become available. Modelling evidence is required to inform how to optimally use these products in immunisation programs to reduce the burden of RSV in young children. MethodsWe extend a dynamic transmission model calibrated to RSV-hospitalisation data of children aged < 5 years in temperate Western Australia (WA)...

13
Paediatric meningoencephalitis in the molecular diagnostic era: Epidemiological insights from 1,198 suspected cases in Germany between 2016 and 2024
2026-02-22 infectious diseases 10.64898/2026.02.15.26346341
Top 2% (2.7%)
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BackgroundThe epidemiology of suspected pediatric meningoencephalitis has shifted in the era of conjugate vaccines and multiplex PCR diagnostics, with viral pathogens now predominating over bacterial causes. Updated epidemiologic data are essential to adapt diagnostic and therapeutic algorithms to current clinical practice. MethodsThis retrospective single-center study included children and adolescents <18 years who underwent lumbar puncture with cerebrospinal fluid multiplex PCR for suspected ...

14
Novel transposon Tn8026 acts as a global driver of transmissible linezolid resistance in Enterococcus via a linear plasmid
2026-03-04 infectious diseases 10.64898/2026.03.04.26347163
Top 2% (2.5%)
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Linezolid is a critical last-resort antimicrobial for multidrug-resistant Enterococcus faecium, particularly against vancomycin-resistant lineages where therapeutic options are severely limited. While resistance has historically arisen through de novo chromosomal mutations, the global emergence of transferable resistance mechanisms threatens to render more infections untreatable. Here, we characterise a recent (2023-2024) hospital-associated outbreak of linezolid-resistant E. faecium in Queensla...

15
Use of serology to assess the probability of public health action needed for trachoma in coastal Ecuador
2026-02-19 epidemiology 10.64898/2026.02.18.26346552
Top 2% (2.1%)
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We evaluated the probability of need for public health action against trachoma in Esmeraldas province, Ecuador. Compared to global references, seroconversion rates to Chlamydia trachomatis Pgp3 in children suggest high probability of action needed in rural villages (91%) and lower in more urban areas (32%), motivating further trachoma assessment.

16
Sustained dengue transmission and seroprevalence in the U.S. Virgin Islands
2026-02-10 epidemiology 10.64898/2026.02.07.26345802
Top 2% (2.1%)
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ObjectiveTo estimate dengue virus (DENV) seroprevalence and assess parental vaccine perceptions among children in the US Virgin Islands (USVI). MethodsA cross-sectional serosurvey was conducted during April-May 2022 among 372 children aged 8-16 years from 15 schools across USVI. Past DENV infection was determined using a dengue IgG rapid diagnostic test. Data on demographics, dengue knowledge, and vaccine acceptance were collected from parents. Catalytic models estimated annual DENV force of in...

17
High burden of maternal and congenital syphilis in Lima, Peru: an epidemiological analysis from 2023-2025
2026-03-05 epidemiology 10.64898/2026.03.04.26347675
Top 3% (2.0%)
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ObjectiveCongenital syphilis remains a preventable cause of fetal and neonatal morbidity and mortality, despite the availability of inexpensive diagnostics and effective treatment. We aimed to evaluate the maternal and congenital syphilis burden at the Instituto Nacional Materno Perinatal, Perus national referral center for maternal and perinatal care. MethodsWe conducted a retrospective analysis of aggregated, de-identified surveillance data from January 2023 to December 2025. Maternal prevale...

18
Leveraging pediatric emergency visits as early signal for respiratory hospitalization forecasting
2026-02-27 epidemiology 10.64898/2026.02.25.26347074
Top 3% (1.9%)
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The COVID-19 pandemic exposed major vulnerabilities of hospital capacity and management worldwide, particularly in intensive care units (ICUs) and emergency rooms (ER), imposing prompt adaptation and resource reallocation. Although SARS-CoV-2 is no longer endangering healthcare systems, winter seasons continue to bring recurrent overload of critical care services, primarily due to respiratory infections. In France e.g., this pattern led to the reactivation of the national emergency response plan...

19
Alcov2: a National Questionnaire Survey for Understanding the Transmission of SARS-CoV-2 in French Households during First Lockdown
2026-02-24 epidemiology 10.64898/2026.02.23.26344954
Top 3% (1.9%)
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We describe a fast, noninvasive, low-cost survey method designed to understand the mode of transmission of an emerging pathogen. It is inspired from the standard household prevalence survey consisting in sampling households and counting the total number of people infected in each household, but refines it with the aim of improving diagnosis and estimating more parameters of the model of intra-household transmission. The survey was carried out in May-June 2020, during part of the first national ...

20
Herpes simplex virus genomes from an under-sampled population in Namibia reveal novel genetic diversity
2026-02-19 epidemiology 10.64898/2026.02.18.26346525
Top 3% (1.9%)
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Herpes simplex virus (HSV) is an endemic pathogen, infecting most adults world-wide. HSV infection can cause a wide spectrum of disease outcomes, ranging from asymptomatic infection or mild lesions to rare cases of infectious keratitis, encephalitis, and death. HSV genome sequences have been shown to differ between individual patients, as well as within individuals. To date, the vast majority of publicly available HSV genomic data has come from Europe and North America. Our current understanding...