Back

Retrospective analysis of clinical and environmental genotyping reveals persistence of Pseudomonas aeruginosa in the water system of a large tertiary children's hospital in England

Sheth, E.; Case, L.; Shaw, F.; Dwyer, N.; Poland, J.; Wan, Y.; Larru, B.

2026-04-24 infectious diseases
10.64898/2026.04.23.26351604 medRxiv
Show abstract

BackgroundPseudomonas aeruginosa is a major cause of healthcare-associated infections in paediatric settings, where its persistence in moist environments such as hospital water and wastewater systems poses a particular risk to neonates and immunocompromised children. AimThe aim of this study was to showcase the long-term survival and transmission of P. aeruginosa in a large tertiary childrens hospital in England which is crucial to develop strategies for water-safe care. MethodsEnvironmental P. aeruginosa isolates were collected from taps, sinks, showers, and baths in augmented care areas of a 330-bed tertiary childrens hospital built to NHS water-safety standards. Clinical isolates were classified as invasive (blood, cerebrospinal fluid, and bronchoalveolar lavage) or non-invasive (respiratory, urine, ear, abdominal, and rectal surveillance). Variable number tandem repeat (VNTR) profiles and metadata were extracted from PDF reports, de-identified, deduplicated, and curated using Python and R. FindingsThis retrospective study analysed nine-locus VNTR profiles of 457 P. aeruginosa isolates submitted to the UK Health Security Agency from a large tertiary childrens hospital, identifying 56 isolate clusters (each with [≥]2 isolates), of which 19 (34%) contained at least one invasive isolate. The most persistent cluster (Cluster 1, n=20) spanned from July 2016 to September 2024, containing environmental and clinical (invasive and non-invasive) isolates. ConclusionThese findings demonstrate long-term persistence of certain genotypes and temporal overlap between environmental and clinical isolates, highlighting the difficulty in detecting and eradicating P. aeruginosa in hospital water and wastewater systems and reinforcing the need for continuous rigorous water system controls.

Matching journals

The top 10 journals account for 50% of the predicted probability mass.

1
Microbial Genomics
204 papers in training set
Top 0.2%
8.4%
2
PLOS ONE
4510 papers in training set
Top 22%
8.4%
3
The Lancet Microbe
43 papers in training set
Top 0.1%
6.3%
4
Journal of Hospital Infection
27 papers in training set
Top 0.1%
6.3%
5
Journal of Medical Microbiology
20 papers in training set
Top 0.1%
3.7%
6
Science of The Total Environment
179 papers in training set
Top 2%
3.6%
7
Eurosurveillance
80 papers in training set
Top 0.3%
3.6%
8
Water Research
74 papers in training set
Top 0.6%
3.6%
9
Nature Communications
4913 papers in training set
Top 41%
3.6%
10
The Journal of Infectious Diseases
182 papers in training set
Top 1%
3.6%
50% of probability mass above
11
One Health
29 papers in training set
Top 0.4%
2.6%
12
Infection Control & Hospital Epidemiology
17 papers in training set
Top 0.1%
2.6%
13
Journal of Infection
71 papers in training set
Top 0.9%
2.1%
14
Scientific Reports
3102 papers in training set
Top 53%
1.9%
15
Antimicrobial Resistance & Infection Control
10 papers in training set
Top 0.1%
1.9%
16
Environmental Research
46 papers in training set
Top 0.8%
1.7%
17
Environmental Health Perspectives
17 papers in training set
Top 0.3%
1.7%
18
Emerging Infectious Diseases
103 papers in training set
Top 1%
1.7%
19
FACETS
11 papers in training set
Top 0.1%
1.5%
20
FEMS Microbes
14 papers in training set
Top 0.2%
1.3%
21
Clinical Infectious Diseases
231 papers in training set
Top 3%
1.3%
22
Wellcome Open Research
57 papers in training set
Top 1%
1.1%
23
FEMS Microbiology Ecology
47 papers in training set
Top 0.4%
0.9%
24
mBio
750 papers in training set
Top 10%
0.9%
25
European Journal of Clinical Microbiology & Infectious Diseases
15 papers in training set
Top 0.1%
0.9%
26
BMC Medicine
163 papers in training set
Top 6%
0.8%
27
Antibiotics
32 papers in training set
Top 1%
0.8%
28
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 6%
0.7%
29
Journal of Applied Microbiology
18 papers in training set
Top 0.5%
0.7%
30
Environment International
42 papers in training set
Top 1%
0.7%