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Biotropica

Wiley

Preprints posted in the last 90 days, ranked by how well they match Biotropica's content profile, based on 17 papers previously published here. The average preprint has a 0.02% match score for this journal, so anything above that is already an above-average fit.

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Anthropogenic disturbance inverts microclimate stratification in tropical forests

Nunes, C. A.; Berenguer, E.; do Nascimento, R. O.; Martins, R. G.; Metcalf, O. C.; Lees, A. C.; Smith, M. N.; Ferreira, J.; Maclean, I.; Barlow, J.

2026-06-15 ecology 10.64898/2026.06.11.731463 medRxiv
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Tropical rainforests generate and maintain their own microclimate regimes and the resultant cooler, more humid and stable environments foster the hyperdiversity typical of these ecosystems. Although the temporal and spatial (horizontal) distributions of microclimates have been relatively well studied, the vertical dimension has received less attention, and little is known about how forest disturbance affects the vertical stratification of microclimates in tropical forests. In this study, we examine how the vertical distribution of temperatures varies between undisturbed and burned Amazonian forests. We installed five vertical transects with temperature dataloggers distributed at 7 different heights to collect data over multiple days during the end of the dry season. We investigated how anthropogenic disturbance (fire) mediates the vertical stratification of microclimate and whether microclimate buffering (i.e, the difference between understorey and canopy temperatures) varies according to the forest structure. We showed that anthropogenic disturbance can cause an inversion in the vertical stratification of microclimates, with burned forests having hotter temperatures (up to 2 {degrees}C) in the understorey than in the canopy during the day - the opposite of what is found in undisturbed forests (typically 3 {degrees}C cooler). During the night, while understorey and canopy temperatures are similar in undisturbed forests, we found that, in burned forests, understorey temperatures were up to 2 {degrees}C cooler than in the canopy. Microclimate buffering by day was best explained by aboveground carbon stocks, with higher temperature buffering in more carbon rich forests. Our study shows that anthropogenic disturbance alters the vertical stratification of temperatures in Amazonian forests, leading to significant temporal changes along the diel cycle. Future research should focus on understanding these changes across a wider range of disturbance regimes, and explore the consequences for biodiversity and ecosystem functions from the canopy to the forest floor.

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From field naturalism to Bayesian models: fog-frost interaction shapes growth form partitioning along Himalayan gradient

Wangda, P.; Whitman, M.; Ohsawa, M.; Ashton, P. S.

2026-06-30 ecology 10.64898/2026.06.25.733531 medRxiv
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AO_SCPLOWBSTRACTC_SCPLOWMountain gradients facilitate our understanding of species range limits, competition dynamics, stress-resilience trade-offs, and determinants of vegetation zone boundaries. Forest compositional models often use altitude as the main predictor, a proxy for temperature that is defensible where floristic transitions are gradual and climate relationships are linear. However, mountains with distinct assemblages, representing tropical gradients or areas with complex biogeographic history, require a modeling framework that reflects non-linear dynamics or interactions between environmental factors, including outlier events (rather than mean conditions). Our study system encompasses both tropical and temperate forests along a broad ([~]3000 m) altitudinal gradient, positioned within a narrow latitudinal band (< 1{degrees}) and composed of mature, continuous forest in the Bhutan Himalaya. To represent the breadth of climatic conditions experienced over a trees lifetime, we used a Bayesian modeling paradigm and integrated multi-generational field knowledge to develop a priori hypotheses and informed priors, with consideration of monsoon seasonality and possible ecophysiological thresholds. Our approach followed three stages (the Pattern, the Mechanism, the Test). Specifically, we interpolated microclimate data and derived custom metrics based on thermodynamics, propagating uncertainty into subsequent models to test whether climate posteriors outperformed altitude in explaining growth form partitioning. For spatial patterns, we identified six distinct vegetation zones (encompassing 145 species from 57 families), with a mid-gradient peak in richness at the tropical-temperate transition zone, and convergence of deciduousness at either end of the gradient. For individual growth forms, abundance was tied to different ecological mechanisms, explained by adaptations to climatic stressors and competition trade-offs. For instance, evergreen broad-leaved dominance was linked to ephemeral cloud immersion, whereas tropical deciduous species were affiliated with higher vapor pressure deficit at lower altitudes. Most importantly, compositional (between-group) models showed that the interaction between frost events and fog probability (air saturation prior to the dry season) governed growth form partitioning more than any single factor; temperate deciduous species, confined to a narrow altitudinal band, exemplified this finding. Our methodological approach is transferable to other data-sparse mountain systems, and our results highlight the vulnerability of unique habitat types and montane endemics under climate change scenarios that alter the fog-frost dynamics. Second abstract in DzongkhaTo see the second abstract in Dzongkha, the official language of Bhutan, please visit our Zenodo site: https://doi.org/10.5281/zenodo.19081441.

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When suitable habitat is not enough: climate change, habitat loss, and dispersal limitation increase the vulnerability of bald-headed uakaris (Cacajao sp.) in the Amazon Rainforest

Ennes Silva, F.; Mourthe, I.; Plaza Pinto, M.; Rabelo, R. M.; dos Santos Junior, M. A.; Borges, L. H. M.; Diogenes, L. C. R.; Marsh, L. K.; Alvares Oliveira, M.; Ribas, C. C.; Boubli, J. P.

2026-07-03 ecology 10.64898/2026.07.02.736086 medRxiv
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Aims: Species' distributions are determined by the interplay between ecological niche and dispersal ability, constrained by biogeographical barriers. Bald-headed uakaris (Cacajao spp.) are highly specialized primates often associated with seasonally flooded forests. In this study, we used ecological niche models to assess changes in habitat suitability and geographic distribution of uakari species under future scenarios. Location: Western Amazonia. Methods: We integrated ecological niche models, current deforestation data, and dispersal ability to estimate habitat suitability under two Shared Socioeconomic Pathway (SSP) scenarios: intermediate (SSP2-4.5) and very high (SSP5-8.5) greenhouse gas (GHG) emissions. Results: Our models project shifts in suitable conditions for all species. Three of the five species are projected to experience substantial reductions ([&ge;]62%) in suitable habitat conditions within their current ranges by 2050 under both future scenarios. Across the western Amazonia, up to 219,189 km2 and 211,276 km2 of land are projected to be unsuitable within the uakari ranges under the intermediate and very high emissions scenarios, respectively. This is particularly relevant for C. calvus, C. rubicundus, and C. ucayalii. At the species level, the uakaris may lose between 343 km2 and 84,531 km2 of their ranges in the intermediate scenario and 858 km2 and 76,216 km2 in the very high scenario. Shifts in suitability due to climate change are expected to vary from 6 to 191 km in the intermediate scenario and from 5 to 168 km in the very high scenario. Furthermore, the uakaris may lose between 0.5% and 8% of their current ranges due to deforestation in all scenarios. Main conclusions: Our findings reveal a high sensitivity of the uakaris to climate change impacts. It is projected that all species may experience contractions in the suitable areas and spatial suitability within their ranges by 2050, underscoring climate change as a relevant threat to these taxa.

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Biogeographic history and megafauna shape frugivory interaction networks across equatorial forests

Clement, G.; Lotfi, N.; Ong, L.; Campos-Arceiz, A.; Bretagnolle, F.; McConkey, K.; Thomachot, R.; Mello, M. A. R.; Forget, P.-M.

2026-08-13 ecology 10.64898/2026.08.12.744530 medRxiv
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Frugivory is essential for the maintenance of tropical forests, influencing seed movement, spatial structure, and ecosystem functioning. Although frugivory interactions are well documented at local scales, we still know relatively little about how network structure varies across biogeographic regions, particularly in equatorial lowland forests. In this study, we compare frugivory networks in lowland forests in the Guiana Shield (South America), Malaysia (Southeast Asia), and Central Africa (Gabon and Cameroon). Because these sites occur at similar latitudes, they provide a useful setting to examine how evolutionary history and biogeographic context, rather than climate alone, might shape the structure of the network. We analyze patterns across regions, focusing on implications for frugivory interactions and, ultimately, seed dispersal. Guided by the Integrative Hypothesis of Specialization (IHS), we focus on the role of megafauna and other large-bodied frugivores, which are important consumers of large fruits and dispersers of large seeds, and have experienced different historical trajectories in each continent. We also considered whether smaller frugivores, such as rodents, might partially compensate for the loss of Megafauna in the Americas through seed handling and caching behavior. The pantropical comparison revealed structural and functional differences between the studied frugivory networks. In the Guianas, lacking megafauna, the frugivory network showed strong modularity with nestedness within modules, forming a marked compound topology. Alternatively, in Central Africa, with elephants and great apes, the network showed intermediate modularity and nestedness, reflecting a balance between local compartmentalization and regional integration. Finally, in Malaysia, the network was predominantly nested, with a few highly connected species, especially figs and flying foxes, that linked most of the partners. Across continents, frugivory networks tend toward a compound topology, but the relative influence of modular and nested components shifts with biogeography, evolution, and ecology.

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Hiding in Plain Sight: Novel Observations of Plant Crypsis in a Well-Known Symbiotic System of a Hyperdiverse Tropical Forest

Rivas-Torres, G.; Escobar-Ramirez, S.; Macanilla, F.

2026-06-16 ecology 10.64898/2026.06.12.731843 medRxiv
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Devils gardens are among the most striking ant-plant mutualisms in Amazonian forests. In this system, the tree Duroia hirsuta is associated with the ant Myrmelachista schumanni, which actively removes neighboring vegetation and maintains nearly monodominant patches of the host plant. Despite the apparent efficiency of this system, repeated field observations at the Tiputini Biodiversity Station, Yasuni Biosphere Reserve, revealed that individuals of Palicourea alba recurrently occur within active devils gardens. Palicourea alba closely resembles dead plant material, exhibiting leaf morphology and coloration that strongly mimic the surrounding litter layer, and appears to be uncommon outside these gardens. To our knowledge, this "dead-leaf" masquerade has not been previously documented in this intensively studied system, making it a particularly striking and unexpected observation. To evaluate whether this masquerade facilitates persistence within devils gardens, we surveyed 35 gardens and recorded P. alba in 19 (52.8%). When present, P. alba covered on average 27% of plot area, while mean herbivory across sampled leaves remained low (8.6%). Generalized linear mixed models showed that P. alba cover decreased significantly with increasing herbivory (F = 8.09, p = 0.0159), whereas herbivory increased with leaf-litter cover (F = 8.73, p = 0.0120). Field observations further revealed that many individuals are nearly indistinguishable from dry leaf litter, suggesting a role for visual crypsis or masquerade. Together, these results indicate initially, that the persistence of P. alba within devils gardens is mediated by a multi-layered ecological filtering process. First, masquerade likely reduces detection by M. schumanni, allowing seedlings to escape ant-mediated removal. Second, low herbivory suggests either enemy avoidance or reduced apparency to herbivores within the simplified understory. Third, spatial heterogeneity in leaf-litter cover may create microhabitats where both ant activity and herbivore pressure are modulated, reinforcing establishment success. This system thus represents a previously undocumented mechanism in which plant-litter resemblance enables persistence within a highly structured, biotically filtered habitat, highlighting how subtle trait-mediated interactions may modulate outcomes in otherwise strongly deterministic mutualisms.

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Laser scanning identifies large trees as a major source of uncertainty in mangrove carbon accounting

Jackson, T. D.; Feyen, J.; Lozano-Arias, L.; Caicedo-Garcia, J.-P.; Sierra-Correa, P. C.; Montes-Chaura, C. C.; Sanjur, A. A.; Hoyos-Santillan, J.; Castillo, D.; Castillo, Y.; Wortel, V.; Ouboter, M. P.; Tjong-A-Hung, N. S.; Amiemba, D. L.; Rambharos, C. S.; Paloeng, C. P.; Moe Soe Let, V. A.; Hardin, R.; Porter, F. R.; Kerr, O. O.; Rodriguez Hernandez, D. I.; Digby, M. A.; Jucker, T.; Fischer, F. J.; Calders, K.; Price, C. A.; Mathura, F.; Asmath, H.

2026-06-16 ecology 10.64898/2026.06.12.731900 medRxiv
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BackgroundMangrove forests are crucial ecosystems which support biodiversity, protect coastlines and store vast amounts of carbon. Mangrove conservation and protection rely on accurate carbon accounting to unlock investment. However, the allometric equations underpinning these carbon estimates remain poorly constrained, particularly for the large trees. MethodsWe used terrestrial laser scanning (TLS) to estimate the biomass of 187 mangrove stems across Suriname, Panama, Colombia and Jamaica, including 84 stems >20 cm DBH. TLS-derived biomass estimates were used to evaluate local, regional and pantropical allometric equations. ResultsMost diameter-based allometric equations underestimated biomass by 8-65%. Equations additionally incorporating tree height performed better, but still underestimated biomass by 12-16% on average. Applying alternative allometries to a representative mangrove inventory from Panama produced biomass estimates ranging from 80 to 200 Mg ha-{superscript 1}, demonstrating that allometric uncertainty alone can generate more than a two-fold difference in estimated carbon stocks. ConclusionsCurrent allometric equations systematically underestimate the biomass of large mangrove trees and are therefore likely to underestimate mangrove carbon stocks. TLS provides a practical, non-destructive approach for expanding biomass datasets and improving allometric equations. Reducing allometric uncertainty should be a priority for strengthening blue carbon accounting and mangrove conservation.

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Plant-pollinator interactions along an elevational gradient in Central European forest understorey

Sounapoglou, A.; Janecek, S.; Sakhalkar, S. P.; Kobe, I. N.; Chmelova, E.; Anyz, D.; Delabye, S.; Filip, J.; Hodecek, J.; Jackwerth, K.; Piplova, R.; Hanzelkova, K.; Krizek, T.; Klomberg, Y.; Mertens, J. E. J.; Tropek, R.

2026-08-20 ecology 10.64898/2026.08.15.745048 medRxiv
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Elevational gradients provide a framework for understanding how environmental filtering reorganises communities and interactions, but plant-pollinator interactions along temperate forest elevational gradients remain overlooked. We studied early-spring understorey communities at four forest sites spanning the foothills towards the timberline (450-1,000 m a.s.l.) in the Krkono[s]e Mountains, Czechia. Across six transects per elevation, we quantified flowering plant species richness, floral resources and traits, and video-recorded flowers, yielding 4,003 pollinator visits. We analysed elevational patterns in species richness, community composition, floral traits, and quantitative network characteristics. Visitation frequency and flowering plant and pollinator species richness peaked at intermediate elevations. The contribution of dipteran relative to hymenopteran pollinators increased towards higher elevations, principally because of non-hoverfly flies, whereas individual bee groups showed no uniform response. Floral resources and traits showed no uniform elevational responses, although total nectar sugar availability peaked at the highest site because of the dominant Vaccinium myrtillus. Most notably, both network-level specialisation and mean species-level specialisation were generally greater at the two higher elevations, whereas nestedness was lower and other network characteristics showed no consistent patterns. These findings suggest that shifts in pollinator composition and dominant floral resources potentially shaped interactions along the gradient. The increasing specialisation with elevation contrasts with the generalisation often expected under reduced partner availability and indicates that forest networks may follow elevational patterns not predicted from open habitats. Despite limited site-level replication, this study provides, to our knowledge, the first community-wide characterisation of plant-pollinator interactions along a temperate forest elevational gradient and identifies patterns requiring evaluation across replicated gradients.

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Anthropogenic subsidies reshape Ruby-throated Hummingbird (Archilochus colubris) interactions across spatial and temporal contexts: evidence from community-collected data

Narango, D. L.; Jones, A.; Rebozo, R.; Sosa, P.; Hallworth, M.

2026-07-06 ecology 10.64898/2026.07.03.733347 medRxiv
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1. Ruby-throated hummingbirds (Archilochus colubris) exhibit flower preferences and readily visit human subsidies like feeders. However, foraging behavior and plant-animal interactions may vary across spatial, temporal, and landscape gradients. Despite the popularity and ubiquity of Ruby-throated Hummingbirds in the eastern U.S., there has never been a quantitative assessment of their flower preferences or feeder use across broad scales. 2. We investigated how feeder visitation, flower visitation, and flower trait preferences vary by latitude, season, and land use in the northeastern United States using over 6 million occurrence records of Ruby-throated Hummingbirds and flowering plants, >2,100 annotated hummingbird-flower interactions, and >2,700 feeder visit occurrences. 3. We found that hummingbird feeder use declined over the year, increased with latitude, and was higher in developed landscapes. Flower visitation increased over the year across all latitudes, with higher visitation in developed landscapes. Finally, we found that native plant use diverged between landscapes, such that the probability of visiting a native flower increased over time in non-developed land uses but declined over time in developed ones, demonstrating that hummingbirds track the advancement of native floral phenology and use non-native, cultivated flowers as a human subsidy due to either availability or preferences. 4. Our preference and network models revealed that while hummingbird-plant network structure was similar across landscapes, the composition of important taxa shifted from native, wild species like Monarda and Impatiens to non-native, cultivated species like Salvia. 5. Using trait-based models of flower visitation, we found that hummingbirds preferred native, tubular, and red/orange flowers fitting the hummingbird pollination syndrome despite visiting >260 different plant species. Red and orange flowers were preferred across all seasons, suggesting color may be a reliable signal of nectar availability across species and contexts. Native and tubular flowers were strongly preferred during the breeding season; however, preferences relaxed during spring and fall migration. 6. These findings reveal the consistent preferences of Ruby-throated Hummingbirds for native, tubular, and red/orange flowers, and underscore how spatial and temporal factors reshape foraging behavior and trait preferences. Our results also highlight the value of community-collected data in characterizing plant-pollinator interactions across broad spatial and temporal scales.

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Patterns of species richness and endemism in bee and plant communities in California

Alarcon-Cruz, G.; Jacobs, S.; Baldwin, B. G.; Seltmann, K.; LeBuhn, G.

2026-08-07 ecology 10.64898/2026.08.06.743382 medRxiv
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Understanding the spatial distribution of species and their patterns of endemism is necessary for establishing effective conservation priorities. Despite the vital pollination services bees provide, Californias native bee distribution patterns remain largely unexplored relative to plants and butterflies. We analyzed bee species richness and endemism across California and their concordance with plant distributions. Richness was high across areas of the California Floristic Province, including the Sierra Nevada, San Francisco Bay Area and Central Coast, South Coast Ranges, and the Transverse and Peninsular ranges. Bee endemism was more localized, concentrated in the San Joaquin Valley, eastern Sierra Nevada and adjacent Great Basin, Sierra Nevada foothills, and California deserts. Because richness and endemism appear to operate at different spatial scales and likely respond to different environmental drivers, effective conservation strategies must address both. Additionally, conservation plans that incorporate both plant and bee diversity are needed to achieve more comprehensive biodiversity protection.

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The Iberian white-oak syngameon as a legacy of introgression in southern Europe

Vila-Vicosa, C. M.; Castilho, R.; Vazquez, F. M. P.; Almeida, R. S.; Garcia, C. P.; Pereira, A. B.; Hipp, A.; Avezedo, H.

2026-06-11 plant biology 10.64898/2026.06.09.730892 medRxiv
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Oaks (Quercus L.) are among the most ecologically important tree genera in the northern hemisphere, with an intricate evolutionary history reflected in a reticulated phylogeny. Oak diversity has been profoundly shaped by introgression and diversification, yet the Iberian Peninsula remains an understudied natural laboratory for understanding these evolutionary processes. We used RAD-seq to characterize 38 taxa (including nothotaxa) and investigate the evolutionary history of the Iberian white oaks, with an emphasis on hybrid swarms. Results led to a readdressing of Iberian white oak species, expanding our current understanding of the phylogeography of the European Section Quercus. Furthermore, molecular evidence led to the circumscription of two new subsections, reflecting the contrast between typical temperate and Atlantic distributed species (Group A), and the submediterranean marcescent oaks (Group B). The former unveiled the recovery of Q. estremadurensis and a Northwestern Iberian lineage represented by Q. broteroana and Q. orocantabrica as southwestern representatives of the broad European pedunculate oaks (Q. robur s.l.). The latter led to the validation of hybrid swarms, emphasizing the Iberian oak syngameon and the importance of gene flow to oak evolution. Ultimately, our approach advances the understanding of European white oak evolution across different evolutionary scales, establishing the Iberian Peninsula as an important reservoir of oak diversity.

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Vitamins in native tree pollens are essential to support fitness of wild-caught Bombus spp. queens, with positive carry-over effects

Tissier, M. L.; MacKell, S.

2026-08-19 ecology 10.64898/2026.08.14.744728 medRxiv
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To implement adequate nutritional landscapes to bumble bees and inform conservation efforts, we need a better understanding of how different pollen sources impact bumble reproductive performances and phenology. We assessed the impact of multiple native pollen on bees reproductive success by feeding 40 wild-caught Bombus impatiens and B. griseocollis queens with either commercially wildflower pollen mix commonly used to breed Bombus queens (control group) or 75% red maple pollen (Acer rubrum) and 25% pollen mix (RM group). In a second experiment, we monitored the reproductive success of 45 microcolonies of workers, harvested from B. impatiens colonies. Microcolonies were fed either: 1) pollen mix (N=15), 2) pollen mix and hawthorn (Crataegus canadensis, N=15), or 3) pollen mix and sumac (Rhus typhina, N=15). In experiment 1, RM significantly increased reproductive outputs for both species. RM-fed founding queens were twice more likely to produce workers, and produced them significantly earlier, though total number of workers did not vary between groups. However, RM-fed founding queens produced significantly more brood cells, males and gynes than control colonies, and produced them significantly earlier. In experiment 2, we found an interaction between initial colony diet and current microcolony diet. Overall, workers harvested from RM-fed colonies produced significantly more brood cells and males than workers harvested from control colonies. However, when fed hawthorn pollen during experiment 2, workers from control colonies performed as well as workers from RM-fed colonies. This suggests carry-over effects from early pollen sources provided to colonies on workers, which may be circumstantially offset by pollen sources with specific nutrient profile. Using detailed nutritional information of each pollen (including data on 32 nutrients), we provide nutritional requirements of pollen to support bumble bee reproduction, especially regarding vitamin B3 and vitamin C contents. This study will help inform land managers and captive breeding programs on the ideal pollen sources for bumble bees to ensure reproductively successful colonies.

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OPULATION CHARACTERISATION AND PROPAGATION STRATEGYFOR WILD Coffea eugenioides IN NYUNGWE AND CYAMUDONGO FORESTS, RWANDA: A field assessment of mother trees and an evidence-based seed-source pathway.

Shema, Y.

2026-06-18 ecology 10.64898/2026.06.16.732672 medRxiv
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This report presents a field assessment of wild Coffea eugenioides, the diploid maternal progenitor of cultivated Arabica coffee, in Nyungwe Forest National Park and the adjoining, isolated Cyamudongo forest fragment in south-western Rwanda. The assessment targeted trees identified as candidate mother trees (individuals bearing fruit and therefore potential seed sources): 59 such trees were georeferenced and measured for structural, phenological and reproductive traits using a structured KoBoToolbox questionnaire (reproduced in Annex 1). The work was undertaken to inform the establishment of a seed orchard for this species under the RTRP-Seed (IKI) and TREPA (GCF) projects implemented by Landscape Alliance (CIFOR & ICRAF in action). On C. eugenioides, the cherry is the fleshy fruit that contains the seed, so cherry load is a direct measure of fruit and seed output. Reproductive output across the assessed trees is low, highly variable and weakly related to tree size. The median tree carried an estimated 29 cherries in the whole canopy, 31% of trees carried 15 cherries or fewer, and the coefficient of variation in cherry load exceeded 110%. Tree size explained little of this variation (stem diameter, the single significant structural predictor, accounted for under 10% of the variance; r = 0.31). Trees in the isolated Cyamudongo fragment carried significantly fewer cherries than those in the main Nyungwe block (medians 15 vs 32 cherries; Mann-Whitney p = 0.021), and every observation of sub-optimal on-tree seed quality occurred in the fragment. Low and asynchronous fruiting, together with the reduced fruit and seed set typical of small, isolated populations, makes large-scale seed collection an unreliable basis for an orchard. The original plan was to collect seed from wild trees and raise a Breeding Seed Orchard (BSO). On the evidence presented here, that plan should be redirected toward a Clonal Seed Orchard (CSO): rather than collecting seed, scions (budwood) are taken from selected wild trees and grafted onto vigorous local Rwandan Coffea arabica rootstock. This captures the full genotype of each selected tree, shortens the time to flowering, secures the germplasm of a threatened wild relative ex situ, and aligns with Rwandas restoration and climate commitments.

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Phenotype-environment matching in ground-nesting birds across and within large-scale biomes

Medel, J.; Lin, S.; Briolat, E.; Young, A.; Stevens, M.

2026-06-11 ecology 10.64898/2026.06.08.730407 medRxiv
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Many animals have camouflage appearances that correspond to the habitat where they live, termed phenotype-environment matching. However, this has generally been tested in only a limited number of systems and natural settings, and often not to the relevant vision of key receivers (predators) across different spatial scales. Here, we measured the plumage attributes and putative camouflage used by ground-nesting bird species specialist to particular biomes, specifically tropical rainforest, taiga forest, dry forest, grassland, desert, and tundra from museum specimens. Digital photography and image analysis were used to quantify colour patterns to models of predator vision to understand how different colour patterns may correspond with biome type. With this information, we next created bird models that were photographed in situ in the Valdivian temperate rainforest and Patagonian grassland biomes of Chile to quantify the extent to which plumage coloration and pattern traits provide effective camouflage at different spatial scales. In general, we find that specialist ground-nesting birds express a phenotype that better matches the substrate composition and vegetation structure across large spatial scales of their own biome. This study reveals how animal camouflage works across biomes, relative to the visual system of raptor predators, and at the appropriate distance at which detection may occur.

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Individual-tree phenology reveals climate-dependent responses to urban thermal heterogeneity across U.S. cities

Zhu, J.; Song, Y.; Kong, J.; Meng, L.; Peruzzi, M.; Zhang, Y.; Zhao, L.; Zhu, K.

2026-08-06 ecology 10.64898/2026.08.05.740604 medRxiv
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Rapid urbanization is altering the seasonal life cycles, or phenology, of urban trees. Diverse species composition and heterogeneous urban thermal environments can generate pronounced phenological variation within cities, yet such fine-scale seasonality remains poorly understood. This limits the ability to anticipate localized ecosystem services and disservices, including canopy cooling and pollen exposure. Here, we analyzed individual-tree phenology and their response to temperature across 76 cities in the contiguous United States by integrating municipal street-tree inventories, PlanetScope satellite time series, and 1-km near-surface urban air-temperature data. We quantified intra-city and cross-city phenological variation, estimated species-level associations between phenology and fine-scale urban temperature, and tested whether these associations vary with regional climatic context. Intra-city phenological variation rivaled cross-city variation for 33.3% of species in spring and 53.7% in fall. Temperature-phenology associations were widespread: warmer local urban environments were associated with earlier spring onset in 51.5% of cases and delayed fall senescence in 66.5%, with approximately two-thirds of these responses cascading to longer growing seasons. These associations varied with regional climate, generally showing stronger spring advancement and fall delay in cooler and wetter cities, but weaker or reversed responses in hotter or drier cities. Together, these results suggest that urban tree phenology is shaped by interactions among fine-scale urban temperature, species identity, and regional climate. Accounting for this heterogeneity can improve predictions of urban forest function and inform climate-resilient species selection and management. Plain Language SummaryStreet trees within the same city do not all leaf out in spring or lose their leaves in fall at the same time. This seasonal timing, called phenology, affects services such as shade and cooling, as well as disservices such as pollen exposure. We studied individual tree phenology and their temperature response in 76 U.S. cities using street-tree records, satellite observations, and local air-temperature data. We asked how much phenology varies within cities, how it responds to neighborhood-scale temperature differences, and whether these responses depend on regional climate. Variation within a city was often as large as variation among cities, especially in fall. Trees in warmer parts of cities generally leafed out earlier and lost their leaves later, often extending the growing season. However, these responses were stronger in cooler and wetter cities and weaker or sometimes reversed in hotter or drier cities. These findings show that urban tree seasonality depends on local temperature, species identity, and regional climate, which should be considered when selecting and managing trees for future cities. Key PointsO_LISubstantial within-city phenological variation is not captured by city-level averages. C_LIO_LIFine-scale temperature shaped phenology and growing-season length, but responses varied across species, cities, and phases. C_LIO_LITemperature sensitivity depended on regional climate, weakening or reversing in hotter or drier cities. C_LI

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Differences in functional guild responses to elevation and topography in Himalayan ant communities

Kadambi, N.; Mungee, M.; Athreya, R.

2026-06-16 ecology 10.64898/2026.06.11.731772 medRxiv
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We investigated the influence of small-scale topographic and associated microclimatic drivers on the elevational patterns of functional alpha and beta diversity in ant communities of eastern Himalayas. Ants were sampled along three elevational transects spanning [~]1000-2000 m on two nearby mountain slopes, but differing in aspect, inclination and summit height. Ant genera were quantified at the quadrat level, yielding an abundance of 3090 genus-quadrats (from 22577 individuals in 1215 quadrats), almost evenly split between the two mountain slopes. Each ant was assigned to guilds along functional axes of thermal niche, trophic position and competitive abilities. Comparative analyses of functional diversity profiles along the two mountain slopes revealed no differences in the composite multi-guild alpha and beta diversity but significant differences amongst individual guild profiles. Seven of the eleven functional guilds showed strong elevational trends along the steeper north-facing slope, compared to only two of eleven on the shallower south-facing slope. These results indicate that similar functional space can be maintained despite taxonomic turnover within guilds or shifts in their relative abundances highlighting the influence of fine-scale topographic variation on community assembly. Alternatively, these findings demonstrate that the pattern of multivariate functional diversity across elevation does not necessarily provide an understanding of changing composition of the communities therein.

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Species traits shape the intercontinental introduction patterns of bark and ambrosia beetles

Vilardo, G.; Corley, J. C.; Liebhold, A. M.; Brockerhoff, E. G.; Turner, R. M.; Yamanaka, T.; Estay, S. A.; Lantschner, V. M.

2026-07-23 ecology 10.64898/2026.07.20.738676 medRxiv
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O_LIA negative consequence of international trade is the accidental transport of non-native insect species to non-native regions, but our understanding of how this risk varies among species and how it relates to species traits remains incomplete. C_LIO_LIWe conducted a multi-continental analysis of historical border interception records for bark and ambrosia beetles (Coleoptera: Curculionidae: Scolytinae and Platypodinae), integrating 13,124 interception events (353 species) from Canada, Chile, Japan, New Zealand, and the United States. We estimated an intercontinental propagule pressure index and tested how species characteristics influence transport likelihood. C_LIO_LIInterception assemblages showed low similarity among countries, with 64% of species recorded in only one nation, indicating strong geographic structuring linked to trade pathways. Interceptions were taxonomically and biogeographically non-random: species native to the Palearctic Nearctic and Indo-Malayan regions were overrepresented, whereas Neotropical, Austro-Pacific and Afrotropical taxa were underrepresented. C_LIO_LIHost tree taxa emerged as the strongest predictor of propagule pressure. Species associated with conifers--particularly Pinaceae--exhibited approximately twice the propagule pressure of species restricted to broadleaved hosts. Ambrosia beetles showed higher propagule pressure than bark and twig/seed feeders. Propagule pressure also increased with the number of regions where species have already invaded, consistent with bridgehead dynamics. C_LIO_LISynthesis and applications: Our findings demonstrate that intercontinental transport of bark and ambrosia beetles is strongly structured by host associations, feeding guild, and biogeographic origin, reflecting the composition of traded commodities and historical trade networks. Identifying taxa with consistently high propagule pressure provides a basis for prioritizing surveillance and strengthening global forest biosecurity. C_LI

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Comparative reproductive biology and impacts of selfing in two epiphytic Bromeliaceae

Felton, J. M.; Heschel, M. S.; Bodine, E. N.; Jabaily, R. S.

2026-07-21 plant biology 10.64898/2026.07.20.739642 medRxiv
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AO_SCPLOWBSTRACTC_SCPLOWThe breeding systems of most Bromeliaceae have not been tested directly. We characterized the floral biology and breeding systems of two epiphytic, tank-forming bromeliads endemic to the Atlantic Forest of Brazil, Vriesea rafaelii (Tillandsioideae) and Billbergia brasiliensis (Bromelioideae), using controlled self- and cross-pollinations in a greenhouse. Both species were self-compatible. Based on seed-set, the self-compatibility index was 0.59 in V. rafaelii and 0.87 in B. brasiliensis. In B. brasiliensis, selfed flowers produced lighter fruits and lighter seeds than outcrossed flowers, whereas in V. rafaelii fruit and seed mass did not differ between self- and cross-pollinated flowers. A subset of V. rafaelii flowers showed a spatial separation of the anthers and stigma (herkogamy) that prevented autonomous selfing. These results add two species to the small set of bromeliads with experimentally characterized breeding systems and highlight differences in reproductive output with selfing.

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Hibernation site dimensions influence bat abundance and diversity in the boreal zone

Matlova, M.; Blomberg, A. S.; Tidenberg, E.-M.; Basok, M.; Lilley, T.; Fjelldal, M. A.

2026-08-21 ecology 10.64898/2026.08.18.745443 medRxiv
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Hibernation is a critical phase in the annual cycle of boreal bats, especially near the northern limit of their range where winter conditions are severe and suitable hibernacula are limited. In Finland, anthropogenic structures, such as abandoned bunkers, commonly serve as hibernacula for bats. In this research, we investigate how the size characteristics of bunkers affect species composition and abundance of hibernating bats. The length of the bunker was the best predictor of the presence and abundance of bats. The longest sites ([~]25-26 m) had the highest probability to host all studied species, or group of species of bats, specifically Eptesicus nilssonii, Plecotus auritus, and Myotis bats. Eptesicus nilssonii appeared to be a generalist species, utilizing a variety of bunkers regardless of their length or temperature regime. Still, its number per bunker was relatively low. The highest numbers of Myotis bats were observed in the longest bunkers with stable temperature. The number of P. auritus was positively related to the bunker length; however, it was rare in the studied hibernacula. Different species showed different patterns in hibernacula space usage. Eptesicus nilssonii hibernated in any part of the bunker, while Myotis bats used the most remote from the entrances areas in small sites, and occupied the whole area of the longest bunkers.

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Under-sampled KBAs, over-sampled roadsides: integrating historical and contemporary records of Malagasy bees

Quesada, D.; Leclercq, N.; Marshall, L.; Clark, C. E. D.; Razakamiaramanana, A.; Vereecken, N. J.

2026-08-24 ecology 10.64898/2026.08.23.746540 medRxiv
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Madagascar hosts exceptional biodiversity and endemism, yet its native bee fauna remains poorly characterised. We assembled and cleaned the first comprehensive occurrence dataset for Malagasy bees, reducing 10,721 raw records to 4,071 validated occurrences covering 218 georeferenced species of the 224 checklist species across six families (89.3% endemic). Despite near-complete checklist coverage, the dataset remains critically sparse for Madagascar's size, with most species documented by only a few records. Sampling was highly uneven across taxa: most genera were underrepresented while a few were disproportionately sampled due to ecological prevalence, detectability, and collector specialisation. Spatial concentration within limited grid cells amplified these biases. Temporally, effort varied markedly, with historical peaks driven by individual collectors and a post-2010 shift toward Apidae-dominated records. Spatially, 79.9% of 25x25 km grid cells intersecting Madagascar held no bee records, and 77.1% of records fell within 2.5 km of roads, mirroring global sampling patterns. Sampling clustered near major cities, with common species consistently found near roads and rare species spread across wider distance ranges. Among 231 Key Biodiversity Areas (KBAs), 68.4% were entirely unsampled; sampled KBAs held only 26.7% of all records, and sampling remained uneven even there, leaving substantial undetected diversity across most sites. These results reveal pervasive temporal, spatial, taxonomic, and collector-driven biases, underscoring the need for targeted surveys within KBAs and beyond roadsides to improve coverage of data-deficient species and strengthen conservation assessments.

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Annual ploughing turns wildflower plantings into ecological traps for ground-nesting wild bees

Hellerich, C.; Klein, A.-M.; Garratt, M.; Mupepele, A.-C.; Fornoff, F.

2026-08-26 ecology 10.64898/2026.08.25.746958 medRxiv
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Wildflower plantings are an important conservation measure for supporting wild bee diversity. They aim to enhance floral resources for nutrition, but do not explicitly consider that bees also require suitable nesting and overwintering resources. Wildflower plantings may provide nesting habitat for ground-nesting bees, but the effects of soil management, e.g. ploughing, on ground-nesting bees are hardly known. To study how ploughing and age of wildflower plantings affect ground-nesting bees, we sampled bees on ploughed and unploughed wildflower plantings aged 0-4 years. We used emergence traps to sample bees directly after emergence from the ground, allowing inference on nest numbers. We found that ploughing and wildflower planting age negatively affected overwintering bee nest numbers. Nesting peaked in the year of wildflower planting establishment and declined thereafter, indicating lower habitat suitability at later successional stages. Annual ploughing caused the greatest reduction in nest numbers (-72 %), providing evidence for an ecological trap.