Animals
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Preprints posted in the last 30 days, ranked by how well they match Animals's content profile, based on 20 papers previously published here. The average preprint has a 0.04% match score for this journal, so anything above that is already an above-average fit.
Shimasaki, T.; Yoyou, K.; Kojima, T.; Huang, C.-Y.; Kato, H.; Ishida, M.; Takeda, K.
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ObjectiveStall housing of pregnant sows raises welfare concerns, whereas conventional group housing systems often reduce space efficiency. This study evaluated the effects of periodic group housing (PG) on reproductive performance and welfare compared with continuous stall housing (CS). MethodsSows in the CS group (n = 15) were continuously housed in stalls. In the PG group (n = 15), sows were housed in groups of three and allocated 1 day of group housing and 6 days of stall housing per week over 10 weeks. During group housing sessions, the sows had access to a group housing area containing sawdust. Behavioral observations and salivary cortisol measurements were conducted on the first day of the stall housing session in weeks 1, 6, and 10. Behavioral indices were expressed as proportions based on 90 sampling points recorded at 1-min intervals. ResultsThe number of stillbirths was significantly lower in the PG group than in the CS group (0.63 vs. 1.49 piglets per litter). whereas other reproductive outcomes, including total litter size and average birth weight, did not differ. In older parity sows, the PG treatment markedly increased the proportion of time spent lying, suggesting reduced discomfort associated with restricted movement. Furthermore, the proportion of exploratory behavior decreased markedly, and drinking behavior showed a decreasing trend across parity levels in the PG group, suggesting partial satisfaction of motivations for environmental exploration and oral manipulation. The proportion of oral abnormal behavior showed a pronounced interaction between housing treatment and experimental week, increasing from week 1 to week 6 in the PG group. Salivary cortisol concentrations did not differ between the groups. ConclusionPG may improve reproductive performance and partially satisfy the behavioral motivations restricted under continuous stall housing. This system may represent a practical alternative for improving animal welfare while minimizing economic losses.
Pennington, P. M.; Gillis, J. D.; Tourzani, D. A.; Lambert, C. J.; Nguyen, T. Q.; Metzler, S.; Citino, S. B.; James, M.; Penfold, L. M.; Herrick, J. R.
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Development and use of assisted reproductive technologies (ARTs) in non-domestic species provides novel tools for species conservation. As a first step towards in vitro embryo production, we developed an OPU technique for two antelope species, scimitar horned oryx (Oryx dammah) and roan antelope (Hippotragus equinus) utilizing a custom-made needle guide and existing OPU equipment utilized by livestock and human practitioners. Females were anesthetized and placed in sternal recumbency for transvaginal OPUs. Prior to OPUs (36 - 45 hours), SHO and roan were either hormonally stimulated with follicle stimulating hormone (FSH, 140 or 250IU) as a single injection or not. A total of 32 and 26 OPUs were completed in SHO (n=10) and roan (n=7), respectively, representing one to four OPUs per animal at monthly intervals. A total of 141 oocytes were recovered from 215 follicles in SHO and 31 oocytes from 58 follicles in roan. FSH dose (250IU) increased (P<0.05) the number of follicles aspirated and the number of oocytes recovered in SHO. No effects of FSH were observed in roan (P>0.05). Good quality oocytes were recovered from all females and procedures were conducted in four consecutive months with no evidence of scar tissue buildup or reduced capacity to recover quality oocytes. These ARTs can be used to develop in vitro embryo production tools for population management and the preservation of female genetics; bolstering genetic diversity and guarding against extinction.
Osvath, G.; Denes, A. L.; Kovacs, Z.; Birau, A. C.; Papp, E.; Jako, G. V.; Zeitz, R.
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Romania represents one of the few European Union member states in which all four Old World vulture species historically maintained breeding populations: the Griffon Vulture (Gyps fulvus), Cinereous Vulture (Aegypius monachus), Egyptian Vulture (Neophron percnopterus) and Bearded Vulture (Gypaetus barbatus). Until the 2026 reintroduction efforts initiated by Foundation Conservation Carpathia and Rewilding Romania, Romania remained the last EU country whose former vulture guild had not been targeted for active recovery. Despite this exceptional significance in a European conservation context, no comprehensive synthesis of the historical and contemporary distribution of these species in Romania has been undertaken. We conducted a comprehensive review to gather all available vulture occurrence data and present a fully georeferenced database of 1,170 occurrence records spanning 1818-2025. We systematically searched museum collections, historical ornithological literature, modern field surveys and citizen-science platforms. The database documents substantial breeding populations across the Carpathian arc and Dobrogea until the early twentieth century, followed by near-total breeding collapse between the 1920s and 1960s driven by persecution, secondary poisoning and agrarian transformation. In total, 149 confirmed or probable breeding records have been documented for the four species combined, with the most recent confirmed breeding records dating to 1929 (Gyps fulvus), 1929 (Gypaetus barbatus), 1942 (Aegypius monachus) and 1966 (Neophron percnopterus). Non-breeding occurrences increase markedly after 2010, consistent with dispersal from expanding Balkan source populations. The F[a]g[a]ra {square} and Retezat Mountains emerge as the historically most important breeding strongholds for all four species. Our dataset constitutes the most detailed historical baseline currently available for vulture conservation in Romania and is intended to identify key historical sites with high potential for future reintroduction and recovery. Our results show that Romania historically supported the full guild of European obligate scavengers, and that its collapse occurred within barely four decades (1920s-1960s). The dataset highlights the value of reconstructing historical baselines in regions where functional extinction preceded the onset of modern monitoring, and provides an empirical foundation for reassembling a keystone scavenger guild at a continental scale.
Garibian, P.; Rubleva, V.; Burlakov, A.; Valeyev, V.; Kasatkina, A.; Kirova, V.
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Intraspecific morphological variability presents a complex challenge for biological systematics and biomonitoring, particularly for organisms with high phenotypic plasticity, such as zooplankton. Morphological differences between individuals of the water flea species Bosmina longirostris (Crustacea: Cladocera) are difficult to distinguish visually, parthenogenetic females look morphologically uniform within the species; nevertheless, they demonstrate differences attributable to their geographic origin and developmental stage. A reference dataset of microscopic images was created for the study, including populations from two geographically separated regions (seven ones from European Russia and seven ones from Sakhalin Island in the Pacific Ocean (Far East of Russia) and two age groups, demonstrating the ability of a neural network classify to successfully the intraspecific morphological variation. This study demonstrates that deep learning methods are prospective for the detection and understanding of fine morphological intraspecific differences in the cladocerans.
Montblanc, M.; Harvey-Carroll, J.; Vanassche, J.; Donaldson, M.; Connelly, E.; Hywood, L.
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Giant pangolin (Smutsia gigantea) is one of the least studied pangolin species worldwide, with no published hematological and biochemical data available. We report the first blood parameters from a rehabilitated adult male from Campo Maan National Park (southern Cameroon). Hematological and biochemical findings are described and discussed in relation to available data from other pangolin species. These preliminary results provide the first reference framework for this species and highlight their relevance for clinical assessment, health monitoring, and conservation management.
Wu, T.; Li, C.
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The genus Trichiurus is the most economically valuable fish in the family Trichiuridae, currently recognized to include 10 valid species. However, historically numerous morphologically similar congeners have been erroneously assigned as synonyms or subspecies of T. lepturus. In this study, we examined 16 hairtail specimens collected from the southern waters of Java Island, Indonesia. Integrated morphological and mitochondrial phylogenetic analyses (COX1 and 16S rRNA), compared against global Trichiurus sequences, revealed that these specimens form an independent lineage that diverged early from other congeners. Consequently, we describe this lineage as a previously undescribed cryptic species. Diagnostic characters include: first anal-fin spine below 36th-37th dorsal-fin rays; anus below 35th-36th dorsal-fin rays; anteriormost tip of supraoccipital well posterior to posterior distal margin of eye; anterior margin of the pectoral-fin spine non-serrated; fangs on both jaws with barb-like processes; upper jaw long, mean 16.6% (15.5-17.6%) of preanal length; snout short, 12.0% (10.9-13.1%) of preanal length; eye small, diameter 5.3% (4.3-5.7%) of preanal length; and absence of hyperostosis on dorsal cranium. We herein propose the name Trichiurus javaensis sp. nov., and provide a formal morphological description and diagnostic characterization of this species.
Lam, H.; Lin, S.; Xu, Z.; Yau, C. S. T.; Wu, L.
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For over four decades, the bivalve Anomalocardia flexuosa has been recorded in Hong Kong coastal waters. However, the known native distribution of this heavily exploited commercial species is restricted to the Atlantic coast of South America, raising questions about the biogeographical validity of the Hong Kong populations. By employing an integrative taxonomic approach combining morphological re-evaluations and molecular phylogenetic analysis of the COI gene, we confirm that the species in Shui Hau, Hong Kong, China, has been historically misidentified. The population belongs to Cryptonema producta (syn. Anomalocardia producta).
FERNANDEZ SALOM, M. J.; CARABAJAL, M. P. A.; DI LULLO, D.; VILLA MICO, H. D.; FORMENTINI, E. A.; Cantero, M. D. R.; Cantiello, H. F.
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Cystic echinococcosis (CE), caused by the larval stage of Echinococcus granulosus, remains a significant public health and veterinary problem in endemic regions. Although chemotherapy and control programs exist, the development of complementary immunotherapeutic tools is increasingly needed. This study evaluated the generation and functional activity of hyperimmune serum (HIS) produced in three adult male castrated llamas (Lama glama) immunized with antigenic material derived from protoscoleces (PSCs) of the parasite. Sera collected after each of the first six immunizations were assessed by ELISA to quantify antigen-specific IgG responses, and their biological effects were tested in vitro using viable PSCs. Motility was measured using video-assisted paired-image scoring across serial serum dilutions (1:2-1:2048), and the methylene blue exclusion assay was used to assess viability. Hyperimmune serum produced a clear, reproducible, dose-dependent inhibition of PSC motility and viability. Higher titers of early inoculations reduced motility by 70-85%, while sera from the fifth and sixth inoculations achieved complete suppression. Naive serum and PBS controls showed no inhibitory effect. ELISA titers strongly correlated with biological activity, indicating that higher humoral responses predicted functional inhibition. These findings demonstrate the feasibility of generating potent anti-Echinococcus granulosus polyclonal antibodies in camelids and support their potential application in passive immunization strategies. The study establishes a foundation for future development of llama-derived immunobiological reagents, including nanobody-based tools, for the control of cystic echinococcosis.
O'Malley, C.; Paterson, E. A.; Tambadou, H.; Moreau, E.; Ekundayo, O.; Puoliväli, J.; Collymore, C.; Turner, P. V.
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Standard rat housing may impede species-typical behaviors and impact rat welfare and research outcomes. This research investigated the effects of housing on behavioral and physiological outcomes of rats through the use of modified large animal cages for housing, and was conducted in two studies. Study A: 70 Sprague Dawley (SD) rats (34 males, 36 females; 5 wk old) were randomly assigned to standard polycarbonate shoebox cages (C: 733.9cm2) or modified stainless steel primate cages (T: 10,416cm2) for 18 days. In Study B: 48 SD rats (24 males, 24 females; 7.5 wk old) were held in T housing for 90 days to assess long term impacts. All rats received gentle handling for 15s 3x/week. Rats were assessed for body weight, anxiety-like behavior in an elevated plus maze, response during a voluntary human approach test, and overall home cage behavior, posture, and space usage. Data were analyzed using generalized linear mixed models, with sex and treatment as fixed effects, and cage as the random effect. The results of study A suggest that the modified large animal cages (T) had positive impacts on rat behavior and welfare. T rats were less anxious (P=0.038) and more active (P<0.0001) and explorative (P=0.0003) compared to C rats. In both groups, activity levels declined towards the end of the 18-day study period (P<0.0001). For study B, similar patterns were observed, with rats becoming more inactive (P<0.0001) over 90 days. However, rats spent significant time on elevated shelves in T housing, which increased throughout the study (P<0.0001), suggesting continued use of the resources the housing provided. In both studies, there were no differences in latency to approach humans (P>0.05), but T rats spent less time in contact with human handlers, suggesting differences in motivation to interact with humans that should be explored further.
Oliveira, M. B.; Bernardino, H. S.; Vieira, A. B.; Barroso, A. A.; Augusto, D. A.
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The automated classification of animals from photos is important in ecology and conservation biology for organizing and understanding the immense diversity of species, as well as facilitating effective conservation and management practices. It is equally important for disease surveillance systems, allowing prompt detection of anomalies in species distributions and boosting citizen-scientist platforms by making user-reported data more accurate and convenient. Image classification uses photos and can also rely on the geographical locations of animals to improve performance. While image classification models have difficulties in classifying low-quality images, unbalanced datasets, and with a small number of images, species distribution models have difficulty in classifying species that coexist in a given region. We propose here strategies for combining image classification models based on deep neural networks with species distribution models using genetic algorithms. The proposal is applied to a real-world dataset comprising fifteen classes of animals from the Brazilian fauna obtained from Fiocruzs citizen-scientist Wildlife Health Information System (SISS-Geo). The SISS-Geo photos portray the reality of animals in their environments, with varying quality, and pose numerous difficulties for classification. Experimental results demonstrate that the proposed integration consistently outperforms standalone models. While individual SDMs achieve Top-1 accuracies of 27.79% (MaxEnt) and 31.76% (Bioclim), and CNN-based classifiers reach 58.17% with ResNet50 and 64.13% with ResNet-152, the hybrid strategies yield substantial improvements. The genetic algorithm-based integration with a single global weight achieves up to 67.96% Top-1 accuracy, whereas the class-specific integration using fifteen parameters attains the best overall performance, reaching 69.03%.
Telagarapu, V. M.; Ravuri, S.; Veeramachaneni, P.; Bankura, S. R.; Kumar, N.
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Background: Literature on the role of thermal discomfort (heat- and cold-stress) on in-vitro fertilization (IVF) outcomes are scarce and inconclusive. This multi-center research examines association between heat stress and IVF treatment outcomes in Andhra Pradesh, which is prone to year around chronic heat stress. Methods: IVF data were abstracted from clinical chart review of all patients from three IVF from centers 2019 to 2023, which included time-stamped data on each IVF procedure, demographics and pre-existing comorbidities. Weather data were acquired from the National Climatic Data Center (NCDC). IVF outcomes were modelled with respect to time-lagged exposure to ambient temperature stratified by hyper- and hypo-thermic conditions using Poisson and logistic regressions depending on the scale of IVF outcomes adjusting for confounders. Results: Heat stress peaked in June, which corresponded with elevated number of spontaneous abortions/miscarriage (SAM). Under hypo- and hyper-thermic conditions a unit increase ambient temperature was associated with an 11% higher and an 8% lower number of oocytes retrieved, respectively. Adjusting for confounders, a 10 degree F increase in two-day lag heat stress was associated with a 30% higher odds of SAM (odds ratio ~ 1.03; 95% CI = 1.001 to 1.068; p-value < 0.043), and odds of PTB were 3 times higher when three day-lagged heat index (HI) was greater than 35 degree C (odds ratio 1.13 to 7.99; p < 0.05). Conclusion. Our findings warrant strategies to engage IVF patients in mitigating their exposure to thermal discomfort before and during the treatment.
Yang, S.; Rajapaksha, K.; Zwiefelhofer, E.; Adams, G.; Anzar, M.
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Conventional semen cryopreservation involves equilibration at 4{degrees}C and optimum freezing rates. We hypothesized that a cholesterol-based semen extender obviates the need for equilibration, minimizing total processing time for semen cryopreservation. Experiments were conducted to determine the effects of semen extender (egg yolk- or cholesterol-based) and freezing method (routine or fast) on post-thaw sperm characteristics and fertility of beef and bison semen. In Experiment 1, beef semen diluted in tris-egg yolk-glycerol (TEYG) or cholesterol-cyclodextrin tris-glycerol (CCTG) extender underwent routine or fast freezing method. Cholesterol from animal and plant origins were compared. The routine method included 90-min equilibration at 4{degrees}C and routine freezing (RE-RF, total time 97 min) whereas the fast method included no equilibration and fast freezing (NE-FF, total time 14 min). Post-thaw sperm quality was assessed by CASA, and in vitro fertilization. Post-thaw sperm motility was not affected by the origin of cholesterol (animal or plant), but was lowest in the TEYG NE-FF group (24% vs 43-51%, P < 0.05). In vitro cleavage and blastocyst development rates did not differ between RE-RF and NE-FF groups. In Experiment 2, bison semen was diluted in TEYG or plant-CCTG extender and frozen as in Experiment 1. Post-thaw sperm motility was lowest in the TEYG NE-FF group (10% vs 39-51%, P < 0.05). In Experiment 3, beef semen diluted in TEYG or plant-CCTG extender underwent either a routine (RE-RF) or modified freezing (NE-RF, total time 25 min) method. Post-thaw sperm characteristics did not differ between extenders but were greater using routine freezing (RE-RF) compared to the modified method of freezing (NE-RF). Pregnancy rates were similar between extenders (TEYG vs plant-CCTG) using the modified freezing method without equilibration and insemination at 72 h after progesterone device removal. In conclusion, beef and bison semen diluted in cholesterol-based extender may be cryopreserved without equilibration.
Keding, L. T.; Liu, R.-Y.; Keding, T. J.; Vazquez, J.; Bockoven, C. G.; Shah, D. M.; Golos, T. G.; Wieben, O.; Stanic, A. K.
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IntroductionHealthy and diseased placentae alike often display some degree of pathology. However, quantitative techniques to characterize common pathologies and their relationship to local maternal hemodynamics in healthy primate placentae are currently limited. MethodsPlacentae from seven rhesus macaques were imaged by MRI at three time points across mid-to late-gestation, to quantify placental blood volume, flow, and perfusion from maternal spiral arteries across pregnancy. Near term, we collected placental cotyledons, digitized hematoxylin/eosin-stained slides, then segmented and annotated sub-tissues and major pathologies (intervillous gaps, fibrin deposition, villous agglutination, inflammatory agglutination, and stromal mineralization) within each cotyledon. Individual pathologies were assessed in relation to each other and MRI perfusion metrics, in a cotyledon-specific manner. Parallel analyses were performed to investigate both basic (Spearman correlation) and animal variance-negated (dimensionality-reduction) relationships. ResultsCotyledons with increased stromal mineralization demonstrated low blood perfusion across pregnancy, alongside significant compensatory changes. Mineralization was further associated with decreased fetal weight, across all sub-tissues. Dimensionality reduction revealed maternal vascular malperfusion-associated pathologies as the largest contributor to dataset variance. Additionally, pathologies commonly associated with healthy placental function demonstrated low cotyledon blood flow and volume at all timepoints, with no evidence of compensatory changes across gestation. ConclusionsComprehensive digital annotation revealed several relationships connecting pathology and maternal blood perfusion in the healthy primate pregnancy, at the smallest functional unit of the placenta. This methodological framework embeds pathologist-refined morphological expertise into a quantitative, spatially resolved format that can ground, rather than be replaced by, unsupervised computational approaches to placental analysis.
Linan Moyano, S.; Companys Oliva, B.; Alvarez Sanchez, A.; Turo Silanes, M.; Rodero, C.; Salvador Costa, X.; Piera, J.
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BioBlitzes are widely used citizen science events that combine biodiversity monitoring, public participation, and environmental awareness through short and intensive observation campaigns. However, applying this model to marine environments presents additional challenges related to safety, access, weather dependency, specialised equipment, species identification, and sustained participation. This paper presents the BioMARathon model as a case study of how BioBlitz-inspired events can be adapted to marine citizen science contexts. The BioMARathon extends the conventional BioBlitz format into a longer, seasonal, and distributed engagement model designed specifically for marine and coastal environments. The paper describes the conceptual foundations of the model in the Janus Engagement Framework, which informed both the design of the BioMARathon and the adaptation of the MINKA citizen science observatory to better support participation, validation, feedback, and continuity over time. BioMARato Catalunya, launched in 2021, is presented as the founding implementation of the model and as the basis for later replication in Portugal. Between 2021 and 2025, BioMARato Catalunya showed continued growth in participation, observations, and taxonomic coverage, while also contributing to the detection of non-indigenous species, first regional records, and climate-related ecological impacts. Beyond biodiversity outcomes, the case suggests that extending participation across a season, distributing activities through local mobilising organisations, and combining expert validation with visible feedback mechanisms can support recurrent participation, retention, and community reactivation in marine citizen science. Rather than offering a formal causal evaluation, this article contributes practical lessons for the design of citizen science initiatives in challenging environments.
Aminu, S. K.
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Habitat modification is a major driver of avian population change in tropical savanna ecosystems. This study investigated habitat-related variation in the abundance of the Red-cheeked Cordon-bleu (Uraeginthus bengalus) across human settlements and surrounding farmlands in Laminga Village, Jos-East Local Government Area, Plateau State, Nigeria. Field surveys were conducted over a three-week period in November 2024 using 21 line transects sampled during peak bird activity periods. Bird abundance data were analysed using a Poisson Generalized Linear Model (GLM). Results showed that habitat type significantly influenced abundance, with significantly lower abundance recorded in human settlements compared to farmlands ({beta} = -0.836, SE = 0.192, z = -4.359, p < 0.001). Transect length positively influenced abundance ({beta} = 0.028, SE = 0.008, z = 3.600, p < 0.001). Model performance improved substantially from the null deviance (159.88) to the residual deviance (125.85), with an Akaike Information Criterion (AIC) value of 306.32. The findings suggest that farmlands provide more favourable habitat conditions for the species, likely due to greater vegetation availability and reduced structural disturbance relative to settlement areas. The study highlights the ecological importance of low-intensity agricultural landscapes in supporting avian persistence within human-modified savanna environments.
Probst, W. N.
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The use of marine space by human activities is globally increasing, resulting in a competition with spatial management measures for marine conservation. Within the European Union (EU) these measures are currently implemented by the union member states to achieve the UN sustainable development goal (SDG) of protecting at least 10 % of the national marine waters. Further, the EU Marine Strategy Framework Directive (MSFD) and the Nature Restoration Regulation (NRL) are the two main legal means for the implementation of ambitious spatial conservation targets for benthic habitat types, which can range from 10 - 90 %. This study analysis how the targets of the MSFD and NRL are currently met in the German waters of the North Sea and which areas the full implementation of both legislations might require. A spatial optimisation tool ("prioritizr" in R) was used to identify optimised solutions for the conservation of up to 75 % of NRL benthic habitats. The current spatial conservation measures (which ban demersal trawling within certain zones of designated marine protected areas, MPA) are not sufficient to reach the targets of the MSFD and NRL. Extending the exclusion of demersal trawling to the entire area of the MPAs would achieve a sufficient coverage for all habitats except for offshore sand and mud habitats. These could be further protected, when including areas for offshore wind farms, where trawling is also banned. However, to date it is unclear, if and how these (or other human use) areas could be included into spatial conservation regimes, a debate that needs to be resolved to allow for the achievement of the ambitious MSFD and NRL targets.
Aminu, S. K.
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Understanding how anthropogenic disturbance and vegetation structure influence bird abundance is important for biodiversity conservation in rapidly changing tropical landscapes. This study evaluated the effects of anthropogenic and vegetation-related variables on the abundance of the Red-cheeked Cordon-bleu (Uraeginthus bengalus) in human settlements and surrounding farmlands in Laminga Village, Jos-East Local Government Area, Plateau State, Nigeria. Bird surveys were conducted using line transects and quadrat-based vegetation assessments during November 2024. Poisson Generalized Linear Models (GLMs) were used to examine the influence of anthropogenic and vegetation predictors on abundance. Among anthropogenic variables, building density significantly reduced abundance ({beta} = -0.141, SE = 0.060, z = -2.333, p = 0.020), whereas human presence ({beta} = -0.073, p = 0.141) and noise level ({beta} = 0.009, p = 0.592) did not significantly influence abundance. Average grass height showed a marginal positive relationship with abundance ({beta} = 2.008, SE = 1.051, z = 1.910, p = 0.056), while hedgerow presence, hedgerow height, grass cover, and bare ground cover were not significant predictors. The vegetation model produced the lowest residual deviance (91.19) and AIC value (297.66), indicating comparatively stronger explanatory performance. The results suggest that structural habitat characteristics and building density may play more important roles in shaping Red-cheeked Cordon-bleu abundance than human activity or noise levels alone. These findings provide insight into species responses to environmental disturbance in human-modified savanna ecosystems.
Renn, C.; Ciotti, B. J.; Sims, D. W.; Edwards, A.; Turner, R. A.; Hosegood, P.; Sheehan, E. V.
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Designing effective spatial management for chondrichthyans (sharks, skates, rays and chimaeras) requires incorporating critical areas, sites essential for population maintenance, such as reproductive and feeding areas. Yet most area-based measures have been developed without consideration of chondrichthyan habitat use. The Important Shark and Ray Area (ISRA) initiative has been pivotal in designating priority areas through a rigorous, consultative process. To complement this, our study offers researchers a testable definition for generating robust evidence to strengthen future critical area delineations and related management decisions. We define critical areas using three criteria: 1) relative frequency of use, (2) extended within-year occupancy and (3) repeated use across years. This framework enables objective comparison among candidate sites and is generalisable across different critical area types. The definition builds upon established early-life-stage habitat concepts and applies these to broader life-history functions. The utility of this framework is then demonstrated through a systematic review of contemporary peer-reviewed literature of critical chondrichthyan areas in the European Atlantic. The review highlighted 62 critical areas with Strong evidence and 41 areas of Moderate strength evidence, which informed the European Atlantic ISRA selection process. Research effort was concentrated in inshore areas, particularly around the British Isles and Portugal, with biases towards large, threatened and commercially valuable species, whilst chimaeras were notably underrepresented. Early-life stage areas were most frequently identified, whereas resting areas were rarely documented. Evidence patterns and biases are examined in the context of evolving critical area concepts to advance their development and improve the quality and breadth of future research. By outlining a testable definition, identifying key knowledge gaps, and proposing research and reporting guidelines, this work enhances the consistency, comparability, and spatial coverage of future chondrichthyan habitat research to support its application to conservation planning.
Wille, M.; Ross, T. A.; Atkinson, R.; Boyle, D.; Christie, M.; Dewar, M. L.; Douglas, T.; Gray, R.; Hansen, B.; Jessop, R.; Kidd, L. R.; Marks, I.; Mileto, P.; Miller, E.; Neave, M. J.; Ryding, S.; Sutherland, D. R.; Yu, H.; Klaassen, M.
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The panzootic caused by high pathogenicity avian influenza (HPAI) H5N1 clade 2.3.4.4b has been devastating for animals, globally. Despite global spread, the virus remains absent in Oceania. Herein we report the results of our fourth year of enhanced migratory bird surveillance, coinciding with the spring migration of wild birds in 2025; none of the 847 migratory wild birds or 38 marine mammals were positive for HPAI H5N1, although we did detect LPAI. Surveillance remains a critical tool for HPAI H5N1 response, with early detection and rapid response being critical to mitigate the impacts of this virus on animal, environment and human health.
Sampson, H. R.; Wegrzyn, M.; Josephs, T.; Ugokwe, N. I.; Kinsella, A.; Thanki, A. M.; Kalra, D. K.; Roux, A.; Patrick, H. L.; Swift, B. M.; Firth, G.; Odedra, R.; Millard, A. D.; Clokie, M. R.
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BackgroundInfectious bovine keratoconjunctivitis is the most important cattle ocular disease worldwide. The infection is primarily caused by Moraxella bovis and is a highly contagious disease that significantly affects cattle welfare. Currently, antibiotic medication is the primary treatment for infectious bovine keratoconjunctivitis. However, with rising concerns over antibiotic resistance, we propose developing a more targeted therapeutic strategy using bacteriophages (phages). Materials and MethodsWe have isolated the first known Moraxella bovis phages, characterised them according to their genome sequence, local virulence index and with transmission electron microscopy. The host ranges were assessed using 41 clinical M. bovis strains isolated from infected cows. ResultsFour phages were isolated and characterised. Comparative analysis identified a high degree of genomic similarity between the phages MB15, MB16, MB26 and MB43. MB43 was the most distinct, with the smallest host range phenotype. ConclusionsThe isolated phages show therapeutic potential for further development against Moraxella infections.