Animals
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Preprints posted in the last 30 days, ranked by how well they match Animals's content profile, based on 23 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.
Oh, J.; Hoeschele, M.
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Effective animal monitoring is essential for assessing health, behavior, and environmental interactions, particularly in research and welfare contexts. This study presents a low-cost, open-source system designed for non-invasive monitoring of budgerigars (Melopsittacus undulatus), a small parrot species frequently used in animal behavior research. The system integrates a perch-based scale for voluntary weight measurement, a temperature sensor, and a camera for image capture, all controlled by a Raspberry Pi. By leveraging fine-tuned neural networks, the system achieves automated individual recognition with high accuracy, eliminating the need for invasive tagging methods. The modular design ensures accessibility, scalability, and minimal disturbance to the animals, while the accompanying software streamlines data collection, processing including labeling, and visualization. This approach provides a comprehensive solution for continuous monitoring, offering valuable insights for research and husbandry while prioritizing animal welfare.
Sarwer, A.
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Parasitic infection is one of the common health problems of livestock in Bangladesh. Due to the country's climate, heavy monsoon rainfall, low biosecurity in farms, and high humidity, along with presence of suitable vector organisms, gastrointestinal parasitism remains widespread in cattle and other livestock. The standard method of diagnosis is microscopic examination of fecal samples, but this depends on manual observation, which is time-consuming and can lead to human error, mainly because many parasite eggs look similar to each other and samples often contain contaminants that can be mistaken for eggs or cysts. In this study, we tried to apply the YOLOv8 deep learning model for automated detection of parasitic eggs and cysts from microscopic images of livestock fecal samples. Images of clinical cases were collected, annotated, and used to train the model in Python, with batch size 16, auto optimizer, learning rate 0.01, momentum 0.937 and weight decay 0.0005. Training was done using Google Colab, and the model was evaluated using precision, recall, F1-score, mAP50, and mAP50-95. The model achieved a precision of 56%, recall of 24%, F1-score of 33.6%, mAP50 of 33%, and mAP50-95 of 22%. The relatively low recall and F1-score indicate that the model still has considerable limitations, largely due to insufficient species-specific training data and presence of image artifacts. Underrepresentation of some parasite species, such as Trichuris spp., in the dataset also caused class imbalance, which affected the model's ability to detect these species reliably. Despite these limitations, the study indicates that YOLOv8 architecture has some potential to be used for detection of parasitic eggs and cysts from microscopic images, and that further work with larger and more balanced datasets may improve performance and applicability in veterinary diagnostics. Keywords: YOLOv8, livestock parasites, deep learning, microscopic image analysis, veterinary diagnostics, Bangladesh
Anzai, H.; Iwatani, K.; Miyamoto, S.; Tamura, K.; Miyagi, H.; Anzai, H.
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Robotic herding offers a promising off-animal approach to controlling the spatial distribution of grazing livestock. Nevertheless, the habituation of cattle to herding stimuli remains a critical obstacle to its practical use. This study presents the first field investigation of behavioral responses of grazing cattle to herding by a quadruped robot. We compared the herding efficacy of a drone and a quadruped robot, and tracked daily changes in responsiveness during continuous herding. Trials were conducted in a 1.1-ha pasture with Japanese Black breeding cows from June to October 2023. The quadruped robot elicited stronger avoidance responses with shorter latencies than the drone, and herding was more successful with the robot. During consecutive daily herding with the robot, behavioral responsiveness declined progressively over the initial 5 days, at a markedly slower rate than previously reported for drone herding. Following a 24-day interruption, responsiveness partially increased, but declined rapidly again over the subsequent two days. These results indicate that the quadruped robot constitutes a more persistent aversive stimulus than a drone for grazing cattle, although habituation management strategies (such as diversifying stimuli or combining sensory modalities) will be necessary for sustained control of grazing distribution.
Bragg, M.; Muletz-Wolz, C. R.; Freeman, E. W.; Songsasen, N.
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The maned wolf (Chrysocyon brachyurus) is a near-threatened canid species that suffers from gastrointestinal (GI) disease under human care. While the cause remains poorly understood, recent studies report that altered gut microbiota is linked to GI disease in the domestic dog. The goal of this study was to describe the relationship between gut bacteria and environmental factors, GI health, short chain fatty acid (SCFA) peaks, and genetic relatedness in maned wolves. Fresh fecal samples were collected twice from wolves (first collection n = 29; second collection n = 25) housed in six facilities in the United States. Fecal alpha-1 proteinase inhibitor (FA1PI), a biomarker for GI health in canids, and SCFA peaks were quantified. Information on diet, housing group and history of GI disease or inflammation was provided by the zoological facility for each wolf. We characterized gut microbiota using 16S rRNA gene amplicon sequencing with qPCR abundance corrections. We found that dietary fiber gross energy (GE), protein GE, and number of daily produce items influenced gut microbiota. Additionally, there was a negative relationship between dietary fiber GE and Fusobacterium sp. abundance, corroborating previous findings linking fiber to altered gut microbiome composition in canids. Lastly, fiber GE was negatively correlated with FA1PI, connecting fiber to GI health in the maned wolf. Findings from this study suggest that increasing dietary fiber GE changes the gut microbiome and may improve GI health in the maned wolf, highlighting important management decisions that can be considered to maintain a healthy zoo-managed maned wolf population. IMPORTANCEFindings from this study are important because gastrointestinal disease is a common health concern for maned wolves under human care, and the causes are not well understood. The current study found that diet, especially the amount of fiber gross energy, can affect gut bacteria and may support better gastrointestinal health. Diet alterations could be a practical tool for zoos to support management of gastrointestinal health issues in maned wolves. These findings also show the importance of carefully managing diets for a near-threatened species, since better gastrointestinal health may improve overall health and well-being and support reproduction. More research is needed to determine the best amount and type of fiber, but our results provide foundational information for improving care and supporting healthy zoo-managed maned wolf populations.
Sato, J.; Mase, A.; Ito, M.; Yoshida, K.
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While hamsters are commonly housed in groups within pet shops in Japan, small cages are often thought to restrict their physical activity, leading to arguments that larger cages should be provided. Although previous research has investigated how cage size and running wheel availability influence activity levels in individually housed hamsters, no studies to date have examined these specific effects in a social housing context. Therefore, this study investigated how cage size and the presence of a running wheel affect the activity levels of individual hamsters using the group-housing conditions with five hamsters. Video recordings were captured for 24 hours across four distinct cage environments using a camera installed directly above each cage. From these recordings, the distances traveled on both the cage floor and the running wheel were calculated for each hamster and statistically analyzed. The results revealed that overall activity levels were significantly higher in cages equipped with a running wheel than in those without. Although cage size did not yield a statistically significant difference, a marginal trend toward higher activity in larger cages was observed.
Ma, J.; Chen, Y.; Guo, Z.; Xiao, J.; Wu, H.; Luo, J.; Zhang, Y.-p.; Li, Y.
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Abstract The gayal (Bos frontalis) is an endangered semi-domesticated bovine species renowned for its high-quality beef. However, its semi-feral lifestyle, ongoing habitat fragmentation, and extensive genetic introgression from sympatric local cattle have led to dramatic population decline and severe erosion of purebred genetic integrity, posing substantial challenges to its conservation and utilization. To address the urgent demand for rapid, non-invasive, and field-compatible germplasm identification, we developed an integrated artificial intelligence (AI) framework that predicts genomic admixture composition from external morphological images. We constructed a comprehensive dataset comprising 6,245 morphological images and matched genomic sequences from 52 gayals maintained at the Yunnan Provincial Gayal Conservation Farms. Following a preliminary evaluation of nine deep learning models, five were incorporated into a anatomical segment-based multi-modal pipeline, among which Inception_V3 delivered the optimal overall performance. To enhance simultaneous extraction of local fine-grained features and global structural information, we further designed an innovative HybridInceptionViT model by integrating the multi-scale Inception module with the Vision Transformer (ViT) framework. This hybrid model significantly outperformed the baseline Inception_V3, boosting the accuracy of phenotype-derived prediction against genomic admixture estimate from 69.69% to 87.87% (absolute error <15%). This study establishes a practical, low-cost "phenotype-to-genotype" tool for rapid on-site gayal germplasm screening, offering a scalable strategy for the conservation and breeding management of endangered livestock, and holds broad application prospects for agricultural and livestock production systems.
Luttenschlager, H.; Wever, N.; Jansseune, S. C. G.; Hendriks, W. H.; Beckers, Y.; Carpentier, J.; Richel, A.; Francis, F.; Caparros Megido, R.
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Insect proteins represent a promising and more sustainable alternative to soybean meal in swine nutrition. However, high dietary inclusion levels often result in reduced animal performance, indicating that factors other than crude protein concentration should be considered. This study evaluated the protein quality and degradability of feed-grade defatted black soldier fly (BSF) meal in comparison with a conventional organic protein core for post-weaning piglets. Protein content, amino acid composition, reactive lysine, Maillard reaction markers, buffering capacity, and protein hydrolysability were determined. Our results showed that defatted BSF meal exhibited a protein content and amino acid profile comparable to those of the protein core but contained substantially higher levels of free amino acids. Accounting for free amino acids reduced the estimated lysine damage from 18.4% to 10.4%, highlighting the importance of considering free amino acids when determining reactive lysine. In addition, BSF meal exhibited a higher buffering capacity and lower protein degradability than the protein core. These findings provide new insights into the nutritional limitations of feed-grade BSF meal and suggest that a more accurate assessment of reactive lysine, together with dietary strategies to reduce buffering capacity, may improve its utilization in post-weaning piglet diets.
Khaeruddin, ; Hermawansyah, ; Junaedi, ; Syamsuryadi, B.; Kasri,
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This study aims to evaluate the effectiveness of curcumin and penicillin-streptomycin as diluents on changes in the structure and diversity of the chicken semen microbiome during storage. Semen was collected from Kampung chickens (native to Indonesia) and divided into five treatment groups: diluted without antibiotics or curcumin (control), and diluted with additions of 10 micromolar, 20 micromolar, and 30 micromolar curcumin, and penicillin-streptomycin, respectively. The semen was stored at 5 C for 24 hours. The composition and diversity of the semen microbiome were analyzed using 16S full-length amplicon sequencing. Analysis of the top 10 species showed that Uncultured Saccharofermentans sp. and Porphyromonas somerae served as the most dominant and stable core microbiome across all treatments. Alpha diversity analysis showed that the addition of curcumin and penicillin-streptomycin reduced microbial richness (Observed, ChaO1, ACE, and Fisher) in a dose-dependent manner, yet maintained overall diversity (Shannon and Simpson), with the penicillin-streptomycin treatment resulting in the highest species evenness (InvSimpson). Beta diversity analysis revealed extreme separation of taxonomic abundance variance in the penicillin-streptomycin group, whereas the curcumin treatment exhibited a dose-dependent pattern of microbial abundance transition. Venn diagram analysis identified 415 OTUs as the core microbiome and confirmed that curcumin acts through selective filtering that stabilizes the ecosystem without triggering the proliferation of opportunistic taxa. Penicillin-streptomycin acts more rapidly and dominantly in suppressing/killing bacterial populations, however, the addition of curcumin is able to modulate the microbial ecosystem in a more balanced manner by suppressing the growth of harmful bacteria without compromising the integrity of the chicken semen environment.
Chakraborty, S.; Massicot, O.; Allan, B. F.
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Spatial overlap of domestic animals and wildlife can have positive effects such as increased biodiversity in some areas and reduction in forest fires but it can also have negative consequences such as pathogen spillover, vector and pathogen propagation into new areas among others. Thus, understanding the interactions between wildlife and domestic animals on shared landscapes is critical for conservation and management purposes. To investigate these cattle-wildlife interactions, we chose Buck Island Ranch (BIR) in southcentral Florida. We studied spatial overlap between Domestic Cattle (Bos Taurus) and multiple wildlife species such as Wild Boar (Sus scrofa), White-tailed Deer (Odocoileus virginianus), Rabbits (Sylvilagus spp) and others in pasture, semi-pasture, and hammock habitats/vegetation types at BIR. Five management blocks were selected that had pasture and hammock habitats and within each block we established matched pairs of 100m transects. Animal dung samples were surveyed and identified in 13 pairs of transects. We used Wilcoxon signed rank test to determine differences in dung counts between the habitats and calculated Simpson diversity index to analyze the differences in diversity between the habitat types. We found that there was greater dung count of white-tailed deer in hammock habitats compared to pastures (p=0.048) and greater diversity of wildlife in hammocks than pastures (p=0.028). Cattle dung was found in high density in both hammocks and pastures. These results indicate that hammocks are areas shared between cattle and wildlife at BIR and depending on the extent of direct and indirect contacts between these animals there can be a risk for pathogen spillover. We recommend further research on local land and cattle management practices that can facilitate the co-existence of livestock and wildlife.
Arnold, K. M.; Reyes-Corral, W. D.; Howard, O.; Graca, C.; Aguirre, W. E.
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This study investigates the impact temperature-induced vertebral anomalies have on the C-start escape response of Astyanax mexicanus, a model species in evolutionary developmental biology. Employing three temperature treatments to induce varying degrees of skeletal anomalies, we assessed their effects on key swimming performance metrics including, C-start time, curvature coefficient, head displacement distance, and displacement velocity. Through the use of linear mixed models and generalized linear mixed models, our results reveal that specific anomalies such as vertebral fusions and anomalous haemal and neural spines affected the curving ability of C-start escape responses. However, these did not negatively impact other performance parameters, with velocity, distance, and response time showing no significant impacts from any anomaly types, when assessed individually. This suggests a complex interplay between structural deformities and compensatory physiological mechanisms that maintain functional performance. Other variables measured had a stronger and significant impact on swimming performance, including standard length, vertebral number, and temperature treatment, which influenced escape speed, curving ability, and overall locomotor performance. Our findings challenge conventional perceptions about the debilitating impact of vertebral anomalies, indicating that many affected fish can still effectively perform escape maneuvers critical for survival.
Chen, J.; Zhuang, J.; Li, X.; Lin, M.; Lu, Q.; Yan, N.; Lai, D.-H.; Huang, S.
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Parasitic infections pose multifaceted threats to farmed fish, extending beyond direct pathogenicity to facilitate infections of bacteria, viruses, and microparasites. This synergistic interaction often leads to co-infections that significantly exacerbate disease outbreaks and mortality, presenting a severe challenge to aquaculture sustainability. Recently, a novel trypanosomiasis caused by the Trypanosoma carassii spectrum has emerged in cage-cultured Larimichthys crocea along the southeast coast of China, resulting in widespread prevalence and high mortality rates. Although this pathogen is hypothesized to originate from freshwater fish, its transmission route in marine environments has remained elusive. In this study, we investigated potential vectors and intermediate hosts of T. carassii spectrum, including leeches and monogenean in natural marine settings, and simulated transmission pathways using an established laboratory model involving T. carassii spectrum, Micropterus salmoides and the leech Poecilobdella manillensis. First, our field surveys in the coast of Ningde, Fujian Province, revealed a nearly 100% co-infection rate of T. carassii spectrum and the monogenean Neobenedenia girellae in diseased juvenile L. crocea. PCR analysis detected T. carassii spectrum traces in some N. girellae specimens, and subsequent experiments confirmed that N. girellae ingests the trypanosome while feeding on host blood. Furthermore, bacterial co-pathogens, such as Vibrio harveyi, were also detected within N. girellae. We also document two fatal leech infestations: Zeylanicobdella arugamensis in hybrid groupers (Epinephelus moara [female] X Epinephelus lanceolatus [male]) in Zhangpu, and Limnotrachelobdella okae in E. lanceolatus and E. fuscoguttatus in Raoping. These leeches tested negative for trypanosomes but carried pathogenic bacteria that co-infected the host fish; nonetheless, they are established vectors for trypanosome transmission. In a laboratory cohabitation model simulating T. carassii spectrum transmission, infected M. salmoides were housed with healthy conspecifics under three conditions: Group A (with the leech P. manillensis), Group B (no leeches), and Group C (no leeches, with physical separation between infected and healthy fish). After 14 days, blood smear microscopy and PCR analysis revealed infection rates in healthy fish of 58.33% in Group A, 40.00% in Group B, and 0% in Group C. Conclusively, T. carassii spectrum can be transmitted via leeches (with higher efficiency) and may also spread through direct contact under high-density aquaculture conditions, whereas N. girellae may act as an incidental vector, further research is warranted to clarify transmission dynamics in natural marine ecosystems. Additionally, our findings highlight the role of ectoparasites, including N. girellae and leeches, as potential reservoirs and vectors for bacterial pathogens of fish. In high-density intensive aquaculture, this vectorial capacity transforms parasites from primary pathogens into key drivers of polymicrobial disease outbreaks.
Tokunaga, S.; Payne, N. L.; Kawabe, R.; Nakamura, I.; Furukawa, S.; Chiang, W.-C.; Semmens, J. M.; Meyer, C. G.; Watanabe, Y. Y.
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Cruising speed is a key factor affecting prey-search efficiency and migration range in continuously swimming animals. Tunas and lamnid sharks (e.g., white sharks) have convergently evolved traits for high-speed cruising, including the ability to maintain slow-twitch, aerobic red muscle (RM) warmer than ambient water, known as RM endothermy. Despite their well-known high cruising speeds, kinematic features underlying their elevated speeds remain unclear. Swim speed is the product of tailbeat frequency (TBF; Hz) and stride length (SL, the absolute distance traveled per tailbeat; m). RM endothermy is expected to elevate TBF by enhancing muscle contraction performance. Furthermore, within RM-endothermic fishes, tunas and lamnid sharks may exhibit distinct kinematic features because of differences in caudal fin morphology and tailbeat amplitude. Here, we compiled kinematic parameters from 20 fish species, including five RM-endothermic species, measured in the wild using animal-borne sensors. Comparative analyses showed that, for a given body mass and water temperature, RM-endothermic fishes exhibited 1.9 times higher cruising speed and TBF than ectothermic fishes, while SL remained similar. Within RM-endothermic fishes, tunas exhibited 2.3 times higher TBF than similar-sized lamnid sharks, whereas lamnid sharks showed 1.7 times longer SL than similar-sized tunas. These results indicate that RM endothermy is generally associated with higher TBF, while significant kinematic differences remain between tunas and lamnid sharks. This divergence may be partly explained by the greater caudal fin area and tailbeat amplitude in lamnid sharks. It may also reflect contrasting skeletal types of teleosts and elasmobranchs, which potentially influence body stiffness and swimming kinematics.
Adam, L.; Montagna, M.; Roma, V.; Mancini, A.; Papafitsoros, K.
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Wildlife re-identification (re-ID) is a widely used and powerful tool with diverse applications in animal ecology and conservation. Current automated methods typically operate on single images of a single body part of the animal. However, a single encounter may contain multiple images capturing different body regions, each providing complementary individual-specific information. In contrast to automated approaches, researchers often manually select the most suitable images and regions for identification based on factors like visibility, occlusion and image quality. This creates a mismatch between automated methods and field practice, limiting the practical adoption of current automated re-ID pipelines. Here, we address this by introducing an encounter-based, multi-body-part re-ID framework, using sea turtles as a model taxon. Our framework combines three elements: (1) An orientation-aware deep learning model, TurtleDetector, that in addition to the full bodies, it also automatically segments key body regions, i.e. heads, front and hind flippers, from images within an encounter; (2) a hybrid body-part-specific retrieval method, that sequentially combines a fast global-feature model (MiewID or DINOv3) with a more accurate but costlier local-feature model (ALIKED with LightGlue); and (3) a merged identity-prediction strategy that selects the highest calibrated similarity score across all available body parts and images of an encounter. We evaluate the framework on three long-term re-ID datasets spanning three species, loggerheads, greens, and hawksbill turtles, under an evaluation protocol that mirrors real-world, time-aware re-ID workflows. Across datasets, combining multiple body regions consistently improved identification performance over the best-performing single body region, resulting to an increase of 4-6% in top-1 accuracy. Interestingly, body regions traditionally underused in sea turtle re-ID, such as the hind flippers and carapaces, provided complementary identifying information that improved encounter-level re-ID when integrated through the hybrid retrieval method. Our findings demonstrate that automated wildlife re-ID can benefit from moving beyond single-image, single-body-part identification towards encounter-level integration of all available visual evidence. Our work further suggests that, where feasible, field photo-acquisition protocols should aim to capture multiple informative views of an individual during each encounter. Importantly, many species and taxa, including elephants, primates, cetaceans, and other large vertebrates, possess such individual-specific features across multiple body regions, highlighting the broad potential applicability of our framework.
Liu, R.-Y.; Keding, L. T.; Edmondson, R.; Vazquez, J.; Antony, K. M.; Johnson, K. M.; Shah, D. M.; Golos, T. G.; Stanic, A. K.; Wieben, O.
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IntroductionWhile placental perfusion and pathology jointly affect pregnancy outcomes, cotyledon-specific perfusion across gestation and its correlation with local injury is not yet well understood. Ferumoxytol dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) offers a promising way to noninvasively identify cotyledons across gestation and quantify longitudinal cotyledon-specific perfusion changes. Additionally, intraplacental injection of bioactive fibrin sealant allows us to model thrombotic placental injury and further assess cotyledon-level relationships between perfusion and significant injury. MethodsPregnant rhesus macaques (N=13) received intrauterine saline or fibrin sealant injections at gestational day (GD) [~]101 and underwent ferumoxytol DCE-MRI at GDs [~]100, 115, and 145. Placental perfusion domains derived from contrast arrival time were segmented at each imaging time point and matched to cotyledons identified following tissue collection by cesarean section, with cotyledon perfusion quantified longitudinally and correlated with cotyledon-specific quantitative histopathology. ResultsAll pregnancies were successfully carried to term. Fibrin sealant injections induced significantly higher levels of placental pathology compared to saline controls. MRI-derived perfusion domains were largely consistent across gestation and showed predominantly one-to-one correspondence with term cotyledons, with successful perfusion-pathology pairing achieved in 153 cotyledons. Longitudinal cotyledon perfusion changes showed significant positive correlations with villous agglutination injuries. ConclusionsFeasibility of noninvasively tracking placental cotyledon perfusion using ferumoxytol DCE-MRI was demonstrated, and the efficacy of the rhesus macaque thrombotic injury model was confirmed. The positive perfusion-pathology correlations suggested intrinsic placental regulatory mechanisms and functional plasticity. This new framework is promising for future translational studies and validation of ex vivo cotyledon perfusion models. HighlightsO_LILongitudinal tracking of placental perfusion domains with ferumoxytol MRI C_LIO_LISuccessful matching of cotyledons and MRI-derived perfusion domains C_LIO_LIConfirmed thrombotic injury-model induced cotyledon pathology C_LIO_LIMaternal perfusion compensation in presence of villous pathology C_LI
Matlova, M.; Blomberg, A. S.; Tidenberg, E.-M.; Basok, M.; Lilley, T.; Fjelldal, M. A.
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Hibernation is a critical phase in the annual cycle of boreal bats, especially near the northern limit of their range where winter conditions are severe and suitable hibernacula are limited. In Finland, anthropogenic structures, such as abandoned bunkers, commonly serve as hibernacula for bats. In this research, we investigate how the size characteristics of bunkers affect species composition and abundance of hibernating bats. The length of the bunker was the best predictor of the presence and abundance of bats. The longest sites ([~]25-26 m) had the highest probability to host all studied species, or group of species of bats, specifically Eptesicus nilssonii, Plecotus auritus, and Myotis bats. Eptesicus nilssonii appeared to be a generalist species, utilizing a variety of bunkers regardless of their length or temperature regime. Still, its number per bunker was relatively low. The highest numbers of Myotis bats were observed in the longest bunkers with stable temperature. The number of P. auritus was positively related to the bunker length; however, it was rare in the studied hibernacula. Different species showed different patterns in hibernacula space usage. Eptesicus nilssonii hibernated in any part of the bunker, while Myotis bats used the most remote from the entrances areas in small sites, and occupied the whole area of the longest bunkers.
Pershyn, N.; Nielsen, C. K.; Bastille-Rousseau, G.
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Gray fox (Urocyon cinereoargenteus) populations in the Midwestern USA have suffered precipitous declines in recent decades, yet they are relatively understudied. However, understanding survival and cause-specific mortality is vital for declining populations and the limited existing survival studies have been performed outside of the Midwest. We equipped 13 gray foxes in southern Illinois with GPS radio collars to investigate their survival and cause-specific mortality. We calculated the Kaplan-Meier 6- and 12-month survival rates to be 0.79 (95% CI: 0.57-1.0) and 0.53 (95% CI: 0.27-1.0), respectively. We recorded 4 mortalities: 1 disease, 1 gunshot, and 2 unknown causes. While our study has a small sample size, it contributes key information on a data-deficient mesocarnivore suffering from a population decline driven by undefined causes. We recommend further research into the survival and mortality of this elusive mesocarnivore.
Kimura, R.; Yamamoto, N.; Doi, K.
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Background: Acute osteoporotic vertebral fractures (OVFs) may be difficult to detect on conventional radiographs, particularly before substantial vertebral collapse occurs. Comparing supine and sitting lateral radiographs may reveal load-dependent vertebral mobility. This preliminary study evaluated the diagnostic accuracy of supine to sitting dynamic radiography for detecting MRI confirmed acute OVFs. Methods: This retrospective, single center diagnostic accuracy study included consecutive patients who underwent paired supine and sitting lateral radiography and MRI of the same spinal region between April 2024 and July 2026. Dynamic radiographs were interpreted by a board certified orthopedic and spine surgeon who was blinded to the MRI findings. MRI was independently interpreted by a second board certified orthopedic surgeon and served as the reference standard. The primary outcome was patient-level sensitivity and specificity. Vertebra level diagnostic accuracy was evaluated secondarily, with patient cluster bootstrap confidence intervals used to account for within patient correlation. Results: Sixty three patients (mean age, 80.6 years; 51 women [81.0%]) and 490 evaluable vertebrae were analyzed. MRI identified acute OVFs in 34 patients and 36 vertebrae. At the patient level, dynamic radiography yielded 31 true positive, no false-positive, three false negative, and 29 true negative results. Sensitivity was 91.2% (95% confidence interval [CI], 76.3%-98.1%), specificity was 100.0% (95% CI, 88.1%-100.0%), positive predictive value was 100.0%, negative predictive value was 90.6%, and overall accuracy was 95.2%. At the vertebral level, sensitivity was 91.7% (33/36; patient cluster bootstrap 95% CI, 81.3%-100.0%) and specificity was 100.0% (454/454). The three missed fractures involved T9, L2, and L3. No false-positive vertebrae were observed. Conclusions: Supine to sitting dynamic radiography demonstrated high patient level sensitivity and no observed false positive findings for MRI confirmed acute OVFs. It may provide a practical complementary diagnostic option when MRI is not immediately available. However, a negative dynamic radiographic examination does not exclude an acute fracture, and the apparent perfect specificity requires validation in larger, prospective multi-reader studies.
Verschueren, S.; Braunisch, V.; Debons, V.; Arlettaz, R.
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Reliable population estimates are essential for wildlife management, yet monitoring schemes often do not match the administrative scale at which decisions are made. We illustrate this challenge using the Eurasian lynx in the canton of Valais, Switzerland, where official state monitoring is fragmented across three reference areas surveyed in different years. We analyzed three winters (2023-2026) of independent, canton-wide camera trap data, recording 899 independent lynx captures (27, 31 and 34 adults per winter). Lynx distribution and reproduction concentrated in the Northwest and connected to the thriving Pre-alpine populations. Density modelling for 2025/2026 estimated 37 independent lynx (95% CI: 26-52) on the whole cantonal territory, corresponding to a density of 1.09 (0.77-1.56) individuals per 100 km2. These estimates are substantially below the figures improperly extrapolated from a cross-cantonal reference area and conveyed by political authorities. Future lynx management decisions should be rooted in scientifically sound, scale-relevant information.
Tomoleoni, J. A.; Yee, J. L.; Seacord, E.; Staedler, M. M.; Hatfield, B. B.; Carswell, L.; Fujii, J.; Bentall, G. B.; Konrad, L.; Young, C.; Tinker, M. T.; Bowen, L.
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The southern sea otter (Enhydra lutris nereis) population at San Nicolas Island, California, has been monitored annually since the translocation of 140 sea otters to the island was completed in 1990. Monitoring efforts have varied in frequency and method across years. In 2017, in accordance with the National Defense Authorization Act for Fiscal Year 2016, the U.S. Navy and the U.S. Fish and Wildlife Service formally initiated a sea otter monitoring and research plan to determine the effects of military readiness activities on the growth or decline of the southern sea otter population at San Nicolas Island. The monitoring program, at its basic level, includes quarterly seasonal surveys of population abundance, distribution, and foraging activity. This report presents data from the program with a focus on the recent three years from winter 2023 through winter (February) 2026. From 2023 to 2026, we measured an 8.1-percent per annum decrease in population abundance (95-percent confidence interval =1.1-14.6 percent), with 106 total individuals counted as of February 2026. Historically, sea otter habitat usage at San Nicolas Island was concentrated on the west end of the island. Between 2017 and 2019, we observed increased seasonal usage of the north and south sides of the island, and in 2020-2022, a large (approximately 30-40 individuals) group of sea otters (raft) took up residence off the east end. During 2023-2026 the east end raft disappeared, and sea otters returned to their historical habitat usage patterns at the west end of the island. Foraging data were collected from summer 2023 to winter 2026 on a total of 461 foraging dives in 32 foraging bouts, and the majority of identified prey on successful dives (n=325) were sea urchins (124) followed by snails (48), bivalves (41) and crabs (23). One lobster and one octopus were also identified among the sea otter prey items. We combined these data with data from 2020-2022 to estimate overall energy intake rates that averaged 7.7 kilocalories per minute (95-percent credible interval =6.6-9.1 kilocalories per minute). These results can be useful to the planning of future monitoring and research of sea otters at San Nicolas Island.
Buda, K.; Buda, J.; Budka, M.
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The vast majority of birds are diurnal and concentrate their vocal activity during daylight hours. However, some diurnal birds can also be vocally active at night, although the functions of this phenomenon remain poorly understood. We conducted playback experiments in the Warta Landscape Park (central Poland) to determine whether nocturnal singing by diurnal birds serves breeding-related functions by analysing responses to playback of songs from unfamiliar conspecific males. The sedge warbler (Acrocephalus schoenobaenus) was selected as the focal species because it exhibits relatively high levels of nocturnal song activity, while nine additional diurnal species detected near focal sedge warbler territories were included to explore whether responsiveness to nocturnal conspecific song extended across a broader taxonomic range. Playback experiments were conducted during the early and late stages of the breeding season and during the early and late parts of the nautical night. Out of 10 species tested, three responded vocally: sedge warbler, Savi s warbler (Locustella luscinioides), and common snipe (Gallinago gallinago). Sedge warblers did not modify song rate and song duration but increased flight activity after nocturnal playback. Savi s warblers and common snipes produced more vocalisations after playback than before in May, a pattern consistent with territorial defence function. General nocturnal vocal activity was higher at the beginning of the season, suggesting that birds motivation to establish territories and form pairs can extend into the night, providing additional benefits. Moreover, the probability of singing by the sedge warbler was higher in the latter part of the night. Our study demonstrates that nocturnal stimulation of foreign male playback of diurnal birds can elicit vocal responses from conspecifics, suggesting that nocturnal singing can occur in the absence of obvious artificial light pollution, but in the case of some species and environmental conditions, it may contribute to nocturnal social communication, especially in the early breeding season.