Back

Application of modern mathematical methods for species discrimination in the water fleas (Cladocera: Branchiopoda) that appear similar to the human eye: case of Bosmina (Bosmina) longirostris (O.F. Muller, 1776) from European Eurasia and Sakhalin Island

Garibian, P.; Rubleva, V.; Burlakov, A.; Valeyev, V.; Kasatkina, A.; Kirova, V.

2026-05-22 zoology
10.64898/2026.05.20.726562 bioRxiv
Show abstract

Intraspecific morphological variability presents a complex challenge for biological systematics and biomonitoring, particularly for organisms with high phenotypic plasticity, such as zooplankton. Morphological differences between individuals of the water flea species Bosmina longirostris (Crustacea: Cladocera) are difficult to distinguish visually, parthenogenetic females look morphologically uniform within the species; nevertheless, they demonstrate differences attributable to their geographic origin and developmental stage. A reference dataset of microscopic images was created for the study, including populations from two geographically separated regions (seven ones from European Russia and seven ones from Sakhalin Island in the Pacific Ocean (Far East of Russia) and two age groups, demonstrating the ability of a neural network classify to successfully the intraspecific morphological variation. This study demonstrates that deep learning methods are prospective for the detection and understanding of fine morphological intraspecific differences in the cladocerans.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
PLOS ONE
4510 papers in training set
Top 2%
34.0%
2
Scientific Reports
3102 papers in training set
Top 7%
9.4%
3
Science of The Total Environment
179 papers in training set
Top 2%
4.5%
4
Animals
20 papers in training set
Top 0.2%
4.1%
50% of probability mass above
5
Biology
43 papers in training set
Top 0.2%
3.2%
6
BioMed Research International
25 papers in training set
Top 0.8%
3.2%
7
Aquaculture
29 papers in training set
Top 0.2%
3.0%
8
PeerJ
261 papers in training set
Top 4%
2.7%
9
Ecological Informatics
29 papers in training set
Top 0.3%
2.2%
10
Aquatic Conservation: Marine and Freshwater Ecosystems
12 papers in training set
Top 0.1%
2.1%
11
Molecular Ecology Resources
161 papers in training set
Top 0.5%
1.8%
12
Hydrobiologia
11 papers in training set
Top 0.1%
1.3%
13
Royal Society Open Science
193 papers in training set
Top 4%
0.9%
14
Peer Community Journal
254 papers in training set
Top 3%
0.9%
15
Epidemics
104 papers in training set
Top 2%
0.8%
16
Infection, Genetics and Evolution
43 papers in training set
Top 0.9%
0.8%
17
Frontiers in Physiology
93 papers in training set
Top 6%
0.7%
18
Viruses
318 papers in training set
Top 5%
0.7%
19
Malaria Journal
48 papers in training set
Top 2%
0.7%
20
Biology Open
130 papers in training set
Top 3%
0.7%
21
Journal of Fish Biology
14 papers in training set
Top 0.3%
0.7%
22
Sensors
39 papers in training set
Top 2%
0.7%
23
Acta Tropica
13 papers in training set
Top 0.9%
0.7%
24
Limnology and Oceanography: Methods
11 papers in training set
Top 0.4%
0.7%
25
Ecology and Evolution
232 papers in training set
Top 5%
0.5%
26
Global Ecology and Conservation
25 papers in training set
Top 1%
0.5%
27
Methods in Ecology and Evolution
160 papers in training set
Top 3%
0.5%
28
PLOS Computational Biology
1633 papers in training set
Top 28%
0.5%