homeRNA Just Dropped! Streamlining Remote Blood Collection and RNA Stabilization for Smaller Sample Volumes with homeRNAdrop
Eakman, M.; Stefanovic, F.; Liang, W.; Robertson, I. H.; Jindal, A.; Adams, K. N.; Berthier, E.; Haack, A. J.; Theberge, A. B.
Show abstract
At-home sampling can address obstacles to participation in transcriptomics research. We previously developed the homeRNA and homeRNAmax platforms; these custom-designed tubes containing RNA stabilizer interface with a blood tube compatible with upper-arm blood collection devices, allowing for blood collection and RNA stabilization to occur from a participant's home. In this work we introduce homeRNAdrop, an insert for a commercially available blood tube (BD Microtainer) that divides the tube into two compartments: the top compartment holds 200 L blood and the bottom compartment holds ~590 L liquid stabilizer (RNAlater). By combining blood collection and RNA stabilization into the same tube, homeRNAdrop streamlines sample preparation for participants and allows for more compact sample storage for the lab. In a remote pilot study, n=25 participants from across the United States tested the homeRNAdrop kit. The n=23 samples successfully received by the lab show that samples collected using homeRNAdrop are of sufficient RNA quality (all RINs > 6, a common cutoff for analysis) and yield (mean yield=1.44 g) for downstream gene expression analysis. Almost all participants who successfully collected blood using the Tasso Mini device found the homeRNAdrop device easy to use (n=23/24). Overall, this work adds a simplified, user-friendly platform to the growing suite of tools for remote blood RNA stabilization.
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- homeRNA: A self-sampling kit for the collection of peripheral blood and stabilization of RNA 96%
- Your Blood is Out for Delivery: Considerations of Shipping Time and Temperature on Degradation of RNA from Stabilized Whole Blood 94%
- From Home to Transcriptome: Comparing the transcriptomic profile of induced immune response via lipopolysaccharide stimulation in homeRNA and venous blood 92%
Similar papers in this journal
Similar papers in this journal
Similar papers in this journal
- Flexible, Production-Scale, Human Whole Genome Sequencing On A Benchtop Sequencer 93%
- Comprehensive assessment of multiple biases in small RNA sequencing reveals significant differences in the performance of widely used methods 92%
- Consistent ultra-long DNA sequencing with automated slow pipetting 91%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.