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Primates

Springer Science and Business Media LLC

Preprints posted in the last 30 days, ranked by how well they match Primates's content profile, based on 11 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.

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Temperature modulates resting posture, microhabitat use, and day nesting in chimpanzees in a cool montane forest

Al Razi, H.; Muhayeyezu, F.; Mulindahabi, F.; Niyigaba, P.; Bantlin, D. A.; Kaplin, B. A.; Maloney, S. K.; Grueter, C. C.

2026-08-23 animal behavior and cognition 10.64898/2026.08.18.745634 medRxiv
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Behavioral thermoregulation allows animals to reduce the physiological costs associated with variation in the thermal environment, yet little is known about how chimpanzees respond behaviorally to the cool and humid conditions of tropical montane forests. We examined how microclimatic conditions influenced resting posture, sun/shade use, substrate use, vertical position within the canopy, and day nest use in eastern chimpanzees (Pan troglodytes schweinfurthii) in Nyungwe National Park, Rwanda. From March 2024 to February 2025, we collected 5,661 individual behavioral records during 486 contact hours and paired behavioral observations with measurements of ambient temperature, water vapor pressure, wind speed, and rainfall. Bayesian mixed models showed that temperature was the most consistent climatic correlate of resting behavior. Under cooler conditions, chimpanzees were more likely to adopt heat conserving postures, particularly curled and huddled postures, and to use day nests. As temperature increased, chimpanzees increased their use of shade, shifted from arboreal to terrestrial resting, and used lower canopy strata more frequently. Higher wind speed was also associated with reduced use of the upper canopy, whereas rainfall, water vapor pressure, and fruit availability generally showed weaker or behavior-specific associations. These findings indicate that chimpanzees in a cool montane forest flexibly adjust posture, solar exposure, substrate use, vertical position, and day nest use in relation to local thermal conditions. Resting behaviour may therefore provide an important context for behavioral thermoregulation, extending our understanding of chimpanzee thermal ecology beyond the warmer lowland and savanna habitats that have received most previous attention.

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Exploring the only known case of sympatry in sportive lemurs: isolation by distance or speciation?

Salmona, J.; RANJAVAO, B.; RASOLONDRAIBE, E.; RAKOTONANAHARY, A. N.; RALANTOHARIJAONA, T.; Jan, F.; Le Pors, B.; TEIXEIRA, H.; KUN-RODRIGUES, C.; IBOUROI, M. T.; DURHAM, S. A. O.; ZARANAINA, R.; GABILLAUD, V.; BARNAVON, M.; BECK, A.; MONTEIRO, A. R.; SOUSA, A. P.; ALEIXO-PAIS, I.; HOHENLOHE, P.; CARRIERE, S. M.; RAKOTONDRAOMPIANA, S.; RADANIELINA, T.; WOHLHAUSER, S.; RANIRISON, P.; ANDRIAHOLINIRINA, N. V.; RAKOTONDRAVONY, R.; RASOLOHARIJAONA, S.; HELLER, R.; ZAONARIVELO, J. R.; Sgarlata, G. M.; CHIKHI, L.

2026-08-28 evolutionary biology 10.64898/2026.08.27.747501 medRxiv
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Among Madagascar primates, the sportive lemurs (family Lepilemuridae) have seen their species diversity increase from eight in 2005 to 26 in 2009 mostly by applying the phylogenetic species concept to DNA barcode data. Despite the genus being speciose, only one case of sympatry is known from northern Madagascar, where two sportive lemur species described based on low mtDNA divergence, Lepilemur ankaranensis and Lepilemur milanoii, were found to co-occur at the center of their joint distribution range. Here, to clarify the taxonomy of these two species and examine their sympatry, we apply an integrative taxonomic framework to genomic and morphological data from 84 individuals of L. ankaranensis and L. milanoii, encompassing their entire distribution range and the forest of Analafiana, beyond their southernmost limit. Using clustering, multivariate, and isolation by distance analyses, we find no evidence of a sympatric zone and show that despite clear genetic differentiation between regions, the genomic and morphological diversity of the L. ankaranensis, L. milanoii-Analafiana group is clinal and explained by geographic distance. These results clarify that L. milanoii is a junior synonym of L. ankaranensis and that the Analafiana forest population belongs to L. ankaranensis, extending its distribution. It further implies that the 'sympatric' zone, the Andrafiamena forest, hosts conspecific individuals with slightly differentiated mtDNA backgrounds, rather than slightly differentiated sympatric species. Lastly, we re-evaluate the IUCN conservation metrics of L. ankaranensis, which continue to qualify as Endangered (EN) under the B1ab(i-v) criteria.

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Dominance hierarchies are structured similarly in females and males across primate groups

Spicher, L.; Huchard, E.; Lukas, D.

2026-08-19 animal behavior and cognition 10.64898/2026.08.14.744899 medRxiv
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Classic socio-ecological theory predicts that males and females experience different sources and mechanisms of social competition. Whether these differences translate into sex-specific structural properties of dominance hierarchies remains unclear. Here, we compiled 156 dominance interaction matrices from 80 published studies and extracted three commonly used metrics - hierarchy steepness, linearity and the directional consistency index - to investigate the structural characteristics of male and female dominance hierarchies across primates. All three metrics were strongly affected by methodological and demographic variables. Steepness increased with the number of recorded interactions and group size, linearity decreased as matrices became sparser, and directional consistency declined with increasing numbers of interactions. Steepness covaried positively with both linearity and directional consistency, indicating that groups with steeper hierarchies also exhibited more linear and more directionally consistent relationships. We found no sex differences in steepness, linearity or directional consistency. These results suggest that current metrics primarily reflect variation in the sampling effort and the rate of interaction of the recorded behaviour and appear therefore not to capture potential sex differences in the forms of competition. Our findings highlight the need for alternative measures of power asymmetries that are less confounded by sampling effort and demographic variation to better understand how competition and conflict are structured across primate societies.

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Predation of small nocturnal primates (Microcebus) on Madagascar; insights into predator preferences in Andohahela National Park

Hyde Roberts, S.; Segami, J. C.; Harinala, V. J. N.; Rajemison, B.; Rasoarinoro, E.; Goodman, S. M.; Yoder, A. D.

2026-08-26 ecology 10.64898/2026.08.22.746414 medRxiv
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Predation is a major selective force shaping lemur behaviour and population dynamics, yet direct observations remain rare, particularly for small nocturnal species. Here, we document predation on mouse lemurs (Microcebus spp., Cheirogaleidae) in Andohahela National Park, south-eastern Madagascar, and using complementary evidence from radio-telemetry and owl pellet analyses. Two radio-collared individuals were confirmed as prey of endemic snakes, Ithycyphus oursi and Madagascarophis meridionalis (both Pseudoxyrhophiidae), representing the first documented records of Microcebus predation by these species. Examination of owl pellets and prey remains from three sites and from three owl species revealed a single predation event by Asio madagascariensis (Strigidae), likely involving M. tanosi, no evidence of mouse lemur predation by Tyto alba (Tytonidae) despite high local prey availability, and a single and first predation record from Athene superciliaris (Strigidae). Material from A. superciliaris roosts was otherwise dominated by invertebrates, indicating that primate predation is likely opportunistic. Together, these findings expand the known predator guild of mouse lemurs and suggest that snake predation is rarely detected, and its contribution to mouse lemur mortality and population dynamics is likely underestimated. Our findings demonstrate how combining behavioural field observations with dietary evidence can uncover otherwise undetected predation events and clarify predator prey relationships in nocturnal primates.

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Species-specific responses of diurnal birds to nocturnal conspecific song playback

Buda, K.; Buda, J.; Budka, M.

2026-08-27 animal behavior and cognition 10.64898/2026.08.27.747485 medRxiv
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The vast majority of birds are diurnal and concentrate their vocal activity during daylight hours. However, some diurnal birds can also be vocally active at night, although the functions of this phenomenon remain poorly understood. We conducted playback experiments in the Warta Landscape Park (central Poland) to determine whether nocturnal singing by diurnal birds serves breeding-related functions by analysing responses to playback of songs from unfamiliar conspecific males. The sedge warbler (Acrocephalus schoenobaenus) was selected as the focal species because it exhibits relatively high levels of nocturnal song activity, while nine additional diurnal species detected near focal sedge warbler territories were included to explore whether responsiveness to nocturnal conspecific song extended across a broader taxonomic range. Playback experiments were conducted during the early and late stages of the breeding season and during the early and late parts of the nautical night. Out of 10 species tested, three responded vocally: sedge warbler, Savi s warbler (Locustella luscinioides), and common snipe (Gallinago gallinago). Sedge warblers did not modify song rate and song duration but increased flight activity after nocturnal playback. Savi s warblers and common snipes produced more vocalisations after playback than before in May, a pattern consistent with territorial defence function. General nocturnal vocal activity was higher at the beginning of the season, suggesting that birds motivation to establish territories and form pairs can extend into the night, providing additional benefits. Moreover, the probability of singing by the sedge warbler was higher in the latter part of the night. Our study demonstrates that nocturnal stimulation of foreign male playback of diurnal birds can elicit vocal responses from conspecifics, suggesting that nocturnal singing can occur in the absence of obvious artificial light pollution, but in the case of some species and environmental conditions, it may contribute to nocturnal social communication, especially in the early breeding season.

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Chorus Synchrony as a Cue: Influence of Chorus Howl Synchrony from Unfamiliar Packs on Wolves' Behaviour

Kern, V.; Capitain, S.; Wirobski, G.; Arias-Sarah, P.; Newson, M.; Van de Waal, E.; Range, F.

2026-08-24 animal behavior and cognition 10.64898/2026.08.20.745898 medRxiv
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Chorus howls play a central role in wolves' (Canis lupus) social communication, shaping both intra- and inter-pack interactions. While synchrony has been shown to influence perceived threat from outgroups in birds and humans, whether the synchrony of an outside pack's chorus howl plays a role in wolf pack behaviour remains unclear. This study investigated behavioural responses of 19 zoo-housed wolf packs to playbacks of synchronous and asynchronous chorus howls from unfamiliar packs, in comparison to a dove control call. We hypothesized that packs would show stronger intra-pack cohesion and greater spatial withdrawal in response to more synchronous, and thus cohesive - and potentially more formidable - sounding vocalisations. Alternatively, asynchronous howls might elicit stronger responses due to their ambiguity and the "Beau Geste" effect (where asynchronous signals make it harder to infer the number of callers). Synchronous howls resulted in more distance from the sound source and less activity compared with asynchronous howls. This could be interpreted as a more cautious response towards a perceived threat. However, since there was no effect on pack-directed behaviour and no difference between the synchronous and control sound, lower interest or motivation to engage with the stimulus cannot be excluded. In contrast, wolves spent more time near the sound-source after hearing asynchronous howls, approached it more, and oriented towards it for longer compared to synchronous playbacks, a pattern consistent with threat-investigation. In how far these reactions result from a more difficult localisation of synchronous howls or more ambiguity in pack size in the asynchronous playbacks, as well as how this translates to wild wolf behaviour, remains to be investigated.

7
Anatomical mapping and regulation of dopaminergic and octopaminergic neurons during temporal polyethism in the red harvester ant

Zavaleta-Zamora, C.; Fetter-Pruneda, I.

2026-08-06 animal behavior and cognition 10.64898/2026.07.31.742069 medRxiv
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Many social insects, such as ants, change their behavior stereotypically from nursing to foraging as they age, a concept known as temporal polyethism. Biogenic amines are associated with these specific behaviors, but much about them remains poorly understood in these animals. Many aminergic systems lack anatomical characterization, and little is known about the expression of genes required for the aforementioned behavioral phenotypes. Here, we studied Pogonomyrmex barbatus brains and identified the neurons that produce two relevant amines, dopamine and octopamine, by detecting their synthesis enzymes, tyrosine hydroxylase and tyramine beta-hydroxylase, and their transcripts. We also compared the expression of both genes in young nurses and mature foragers by measuring the fluorescence intensity. Dopaminergic and octopaminergic neurons are predominantly located in the protocerebrum and in the subesophageal zone. Neurons that produce dopamine are also present in the optic lobes, whereas octopamine-producing ones show clusters in the antennal lobes. Both genes are downregulated as the organism ages. A reduction in the expression of these genes might be correlated with the mature workers increased propensity to perform extranidal tasks, such as foraging.

8
Robertsonian translocations in Danish sika deer (Cervus nippon). Markers for absent F1-hybridization with red deer (C. elaphus) and implications for selection, speciation and infertility

Tommerup, N.; Alsing, K. K.; Budtz-Jorgensen, E.; Thune-Stephensen, F.; Ingstrup, A. J.

2026-08-18 genetics 10.64898/2026.08.10.743091 medRxiv
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EU has reclassified the sika deer (Cervus nippon) as an undesirable invasive species based on reports that hybridization with the indigenous red deer (C. elaphus) may produce fertile offspring. Since sika-derived DNA previosuly introduced into the red deer population (introgression) cannot be removed, the crucial question is whether new (F1) hybridisation occur. To address this, we analysed the chromosomes in 56 sika and 22 red deer. All red deer had a chromosome number 2n=68. In contrast, the chromosome number in sika ranged from 64 to 67, due to the variable presence of two sika-specific Robertsonian translocations (ROB1,ROB2). In the free-ranging sika population in Jutland, >90% of the sika deer were homozygote for at least one of these ROBs, excluding that they could be F1-hybrids. Moreover, ROB2 was in Hardy-Weinberg equilibrium, further supporting the absence of gene flow between the two species. In contrast, ROB1 was in Hardy-Weinberg disequilibrium, suggesting negative fitness of heterozygotes, including potential F1-hybrids. In Jaegersborg Deer Park, the eight examined sika deer had the same genotype (absence of ROB1, homozygosity of ROB2), supporting that it is a founder population which may have been isolated for [~]100 years. Again, none of these can be F1-hybrids due to the homozygosity of ROB2. We conclude that F1-hybridisation between sika and red deer either does not occur or occur very rarely in Denmark. The study establish the Danish sika-populations as unique models for adressing important biological questions: What underlies the absence of hybridisation? Why are ROBs frequent in sika deer but not in the closely related red deer? How fast do new species/subspecies develop in isolated founder populations? Which factors determine, that some ROBs have little heterozygous effects, whereas others are selected against, with implications for the role of ROBs as genetic barriers promoting speciation, and for fertility problems in some human ROB carriers.

9
Patterns and environmental drivers of amphibian alpha and beta diversity in the Huangshan Mountains, southern Anhui, China

Wang, S.; Wang, Z.; Sun, Y.; He, Z.; Sun, Q.; Wei, J.; Li, Y.; Liu, M.; Shi, J.; Zhang, C.; Wu, S.; Bai, Y.; Zhang, Z.; Zhao, N.; Wang, S.

2026-08-21 ecology 10.64898/2026.08.20.745979 medRxiv
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Understanding the spatial patterns of biodiversity and their environmental determinants is fundamental to ecology and conservation, particularly in mountainous transitional zones where species assemblages can shift rapidly. Amphibians, as highly sensitive organisms, are excellent indicators of environmental change, yet quantitative assessments of their diversity in the Huangshan Mountains-a biodiversity hotspot at the junction of the Palaearctic and Oriental realms in southern Anhui, China-remain limited. We conducted systematic line-transect surveys across 200 grids (5 km x 5 km) during the spring and autumn of 2023 and 2024, recording a total of 10,342 individuals belonging to 23 species, 20 genera, 9 families, and 2 orders. Three species (Fejervarya multistriata, Microhyla fissipes, and Bufo gargarizans) were identified as dominant, and two nationally protected species (Hoplobatrachus chinensis and Andrias davidianus) were detected. Inter-annual alpha diversity did not differ significantly, but pronounced seasonal variation was observed, with spring supporting higher Shannon-Wiener and Pielou evenness than autumn in both years. Using generalized additive models and model averaging, we found that annual precipitation and the normalized difference vegetation index (NDVI) were consistently the strongest positive predictors of Shannon-Wiener diversity, Simpson dominance, and species richness, while species richness also declined significantly with increasing human footprint. Total beta diversity (Soerensen dissimilarity) was very high (0.981) and overwhelmingly driven by species turnover (97.86%) rather than nestedness. Partial Mantel tests and distance-based redundancy analysis further revealed that environmental distances-particularly annual precipitation-significantly shaped overall beta diversity and its turnover component after accounting for geographic distance. These results highlight the predominant role of climatic and vegetation gradients in structuring amphibian assemblages in this subtropical mountainous region, providing baseline data to inform local conservation strategies.

10
The Non-Human Primate Sample Size Calculator: a design tool for longitudinal research projects

Ainsworth, H. C.; Huber, H.; Quillen, E.; Justice, B.; Warren, P. L.; Howard, T. D.; Cox, L. A.

2026-08-12 physiology 10.64898/2026.08.06.743285 medRxiv
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Nonhuman primates (NHP) are crucial models of human health and disease and offer the opportunity to bridge the gap between basic research and the clinic. Given the ethical considerations, high costs, and logistical constraints associated with NHP studies, careful planning is essential to maximize scientific rigor while minimizing animal use. Statistical power calculations, to determine optimal sample size, require knowing the expected number of animals at each timepoint, a challenge for longitudinal studies that must account for natural deaths or disease during a study. Here, we leveraged data from a recent study detailing NHP life- and healthspans to develop a web-based NHP study design tool, available at midas.wakehealth.edu. For 11 NHP species relevant to biomedical research, users can provide study details to generate estimates of sample counts based on natural healthspan trajectories. We envision this tool being used by colony managers and investigators for both study design and monitoring colony health over the course of a study.

11
Regenerating forests around Taï National Park sustain biodiversity despite constrained floristic recovery

Houphouët, A. D. L.; Sangne, Y. C.; Diarrassouba, A.; Ehouman, E.; Herault, B.

2026-08-19 ecology 10.64898/2026.08.11.744329 medRxiv
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Extensive deforestation and disturbance have reshaped forest landscapes in West Africa, including areas surrounding Tai National Park, the largest remaining block of Upper Guinean rainforest. Although many degraded areas are currently undergoing regeneration, the capacity of these secondary forests to recover their biodiversity attributes remains insufficiently assessed within this park. This study quantifies the multidimensional restoration of biodiversity across 125 secondary forest plots and 15 primary forest plots representing 14,731 inventoried individuals in four sectors of the park. Using a Bayesian modelling framework, we estimate recovery trajectories of Shannon diversity, floristic composition, functional traits (wood density, leaf mass per area, seed mass), and conservation-relevant species. The different biodiversity attributes recovered at contrasting rates. Diversity was restored more rapidly ({lambda} = 0.06) than floristic composition ({lambda} = 0.03), and these recovery varied according to environmental variables. Among these, the presence of remnant trees showed the highest median on diversity (0.53 {+/-} 0.61) and floristic composition (0.37 {+/-} 0.17), promoting the rapid recovery of both attributes, followed by prior land use, particularly cocoa farming which also positively influenced the recovery of alpha diversity ({lambda} = 0.03) and floristic composition ({lambda} = 0.02). Regarding functional traits, they displayed contrasting dynamics: specific leaf area and seed mass recovered rapidly along successional gradients, whereas wood density followed a more gradual recovery trajectory. From a conservation perspective, although the proportion of IUCN Red List species remained stable along the successional gradient, old-growth indicator species were significantly more abundant in primary forests. To ensure the long-term conservation of biodiversity, protecting both primary and regenerating forests is essential to preserve the ecological resilience of this park.

12
Hibernation site dimensions influence bat abundance and diversity in the boreal zone

Matlova, M.; Blomberg, A. S.; Tidenberg, E.-M.; Basok, M.; Lilley, T.; Fjelldal, M. A.

2026-08-21 ecology 10.64898/2026.08.18.745443 medRxiv
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Hibernation is a critical phase in the annual cycle of boreal bats, especially near the northern limit of their range where winter conditions are severe and suitable hibernacula are limited. In Finland, anthropogenic structures, such as abandoned bunkers, commonly serve as hibernacula for bats. In this research, we investigate how the size characteristics of bunkers affect species composition and abundance of hibernating bats. The length of the bunker was the best predictor of the presence and abundance of bats. The longest sites ([~]25-26 m) had the highest probability to host all studied species, or group of species of bats, specifically Eptesicus nilssonii, Plecotus auritus, and Myotis bats. Eptesicus nilssonii appeared to be a generalist species, utilizing a variety of bunkers regardless of their length or temperature regime. Still, its number per bunker was relatively low. The highest numbers of Myotis bats were observed in the longest bunkers with stable temperature. The number of P. auritus was positively related to the bunker length; however, it was rare in the studied hibernacula. Different species showed different patterns in hibernacula space usage. Eptesicus nilssonii hibernated in any part of the bunker, while Myotis bats used the most remote from the entrances areas in small sites, and occupied the whole area of the longest bunkers.

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Spy Crickets: Use (or not) of heterospecific acoustic cues for anti-predator responses

Zander, P. K.; Dochtermann, N.

2026-08-14 animal behavior and cognition 10.64898/2026.08.09.742598 medRxiv
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The ability of prey to eavesdrop on predator vocalizations is expected to increase survival by reducing detection and capture. Unfortunately, most research has been conducted in vertebrates, and little is known about this ability in invertebrates. We measured latency to emerge, overall activity, and shelter visits in wild-caught fall field crickets (Gryllus pennsylvanicus) in response to acoustic playback. Stimuli included multiple predator vocalizations, non-predator vocalizations, white noise, and a control. We predicted that crickets would reduce activity, spend more time in shelter, and freeze in response to stimuli representing greater risk. Contrary to our predictions, crickets traveled greater distances, spent more time moving, and spent less time in shelter in response to predator vocalizations versus controls. We did not, however, find clear differences in responses between predator vocalizations and other treatments. Our results suggest that crickets may not differentiate between the vocalizations of predators, non-predators, and other abrupt sounds. Consequently, eavesdropping may not be a viable method of assessing predation risk for this species and its general use remains unclear.

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Female song and breeding phenology of the Nilgiri Flycatcher (Eumyias albicaudatus) in the Shola Sky Islands

Vyas, H.; Arvind, C.; Mangalasami, S.; Vijayan, R.

2026-08-28 ecology 10.64898/2026.08.27.747512 medRxiv
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Assessing breeding phenology using singing intensity can potentially provide insights into a species' responses to climate or habitat change. Although male passerines are known to sing elaborate songs during the breeding season, females of several tropical passerines also sing. The Nilgiri Flycatcher (Eumyias albicaudatus) is an endemic dimorphic songbird found in the southern Western Ghats of India. Despite its limited distribution and its ecological significance as an indicator species of cloud forests, very little is known about its vocal behaviour and breeding ecology. To examine sex-specific differences in vocalisation patterns, we analysed 294 male and 102 female focal songs from two pairs of birds. We then used data from a year-long automated recorder placed near a breeding pair to study the species' singing phenology using the BirdNET Analyser. The two sexes broadly produced similar songs, although males' songs included more notes at a faster pace. The sex-specific detectors failed due to this high similarity among songs of the two sexes, but we were able to automate species-level detection (F1-score = 0.795 at a confidence threshold of 0.1). We found strong seasonality in vocal activity, with peaks in singing during the breeding season, and identified a diurnal peak at dawn. More data are required to parameterise differences in annual vocal activity between the sexes. These detection patterns provide a framework for a landscape-wide examination of Nilgiri Flycatcher phenology and occurrence. This study suggests that automatic detectors can be a reliable tool for assessing singing phenology in birds and provide insights into breeding periods.

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Animal-robot interaction in the field: stronger responses and slower habituation of grazing cattle to a quadruped robot than to a drone

Anzai, H.; Iwatani, K.; Miyamoto, S.; Tamura, K.; Miyagi, H.; Anzai, H.

2026-08-20 animal behavior and cognition 10.64898/2026.08.12.744347 medRxiv
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Robotic herding offers a promising off-animal approach to controlling the spatial distribution of grazing livestock. Nevertheless, the habituation of cattle to herding stimuli remains a critical obstacle to its practical use. This study presents the first field investigation of behavioral responses of grazing cattle to herding by a quadruped robot. We compared the herding efficacy of a drone and a quadruped robot, and tracked daily changes in responsiveness during continuous herding. Trials were conducted in a 1.1-ha pasture with Japanese Black breeding cows from June to October 2023. The quadruped robot elicited stronger avoidance responses with shorter latencies than the drone, and herding was more successful with the robot. During consecutive daily herding with the robot, behavioral responsiveness declined progressively over the initial 5 days, at a markedly slower rate than previously reported for drone herding. Following a 24-day interruption, responsiveness partially increased, but declined rapidly again over the subsequent two days. These results indicate that the quadruped robot constitutes a more persistent aversive stimulus than a drone for grazing cattle, although habituation management strategies (such as diversifying stimuli or combining sensory modalities) will be necessary for sustained control of grazing distribution.

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Evaluation of Locomotor Activity in Group-Housed Hamsters: Effects of Cage Size and Running Wheel Availability

Sato, J.; Mase, A.; Ito, M.; Yoshida, K.

2026-08-27 animal behavior and cognition 10.64898/2026.08.24.746863 medRxiv
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While hamsters are commonly housed in groups within pet shops in Japan, small cages are often thought to restrict their physical activity, leading to arguments that larger cages should be provided. Although previous research has investigated how cage size and running wheel availability influence activity levels in individually housed hamsters, no studies to date have examined these specific effects in a social housing context. Therefore, this study investigated how cage size and the presence of a running wheel affect the activity levels of individual hamsters using the group-housing conditions with five hamsters. Video recordings were captured for 24 hours across four distinct cage environments using a camera installed directly above each cage. From these recordings, the distances traveled on both the cage floor and the running wheel were calculated for each hamster and statistically analyzed. The results revealed that overall activity levels were significantly higher in cages equipped with a running wheel than in those without. Although cage size did not yield a statistically significant difference, a marginal trend toward higher activity in larger cages was observed.

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Modeling two decades of elevational change in endemic bird densities in Hawaiis Kau Rainforest

Patton, P. T.; Judge, S. W.; Royle, J. T.; Sillett, T. S.

2026-08-21 ecology 10.64898/2026.08.20.746003 medRxiv
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Protected areas are vital to the recovery of endangered species. Of the 24 remaining endemic passerines in Hawaii, 16 species are endangered or critically endangered. Yet protected areas in the archipelago are changing as a result of climate change and biological invasions. For example, the non-native southern house mosquito (Culex quinquefasciatus), the primary vector of avian malaria (Plasmodium relictum), has been encroaching upward as higher elevations warm. How the ranges of endemic birds have also shifted their range upward in the Ka[u] Rainforest, the largest native forest on the Island of Hawaii, is not well understood. We used hierarchical distance sampling to characterize how population density has changed from 2002 to 2024 for eight endemic bird species in the Ka[u] Rainforest. For five species, the most parsimonious model included an interaction between year and a quadratic elevation effect. Species that were most common at lower elevations in 2002, e.g., Apapane (Himatione sanguinea), tended to be most common at mid-elevations by 2024. Species that were already most common at higher elevations, such as Iiwi (Drepanis coccinea) and Hawaii [A]kepa (Loxops coccineus), tended to decline in density. For example, Iiwi density at 1,530 m declined from 3.31 birds per ha (95% confidence interval [CI]: 2.67-4.11) to 1.34 birds per ha (95% CI: 1.05-1.71), and Hawaii [A]kepa were completely extirpated from elevations below 1,530 m by 2024. Our results demonstrate how the elevational ranges of endemic species have shifted in response to climate change, biological invasions, and habitat degradation. Translating these results into conservation measures may require a more thorough investigation of the causal mechanisms of these range shifts with finer scale habitat data, under the same hierarchical modeling framework.

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Open-source tag-free monitoring of individual birds using automated weighing and deep-learning recognition

Oh, J.; Hoeschele, M.

2026-08-21 animal behavior and cognition 10.64898/2026.08.17.745158 medRxiv
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Effective animal monitoring is essential for assessing health, behavior, and environmental interactions, particularly in research and welfare contexts. This study presents a low-cost, open-source system designed for non-invasive monitoring of budgerigars (Melopsittacus undulatus), a small parrot species frequently used in animal behavior research. The system integrates a perch-based scale for voluntary weight measurement, a temperature sensor, and a camera for image capture, all controlled by a Raspberry Pi. By leveraging fine-tuned neural networks, the system achieves automated individual recognition with high accuracy, eliminating the need for invasive tagging methods. The modular design ensures accessibility, scalability, and minimal disturbance to the animals, while the accompanying software streamlines data collection, processing including labeling, and visualization. This approach provides a comprehensive solution for continuous monitoring, offering valuable insights for research and husbandry while prioritizing animal welfare.

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Hive position matters: spatial layout and hive colour impact forager traffic and drifting in Melipona quadrifasciata bees

Cipriano, A. P.; Menezes, C.; Munro, M.; Bell, E.; Gruter, C.

2026-08-06 animal behavior and cognition 10.64898/2026.08.01.742195 medRxiv
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Stingless bees are key pollinators of native and cultivated plants, and their management mostly for honey and hive commercialisation has become an increasingly popular practice in Brazil. Hives are commonly kept close together and visually similar in meliponaries, a practice that favours drifting, i.e., the return of foragers to a foreign nest. Distance between hives and layout have been identified as drivers of drifting in the Western honeybee, but evidence for stingless bees, the largest group of social bees, remains scarce. Additionally, stingless beekeepers frequently associate drifting with weakened colonies, uneven honey production, worker fighting, and colony population imbalances. We investigated the effects of hive layout on foraging traffic and drifting in the stingless bee Melipona quadrifasciata. We compared forager traffic across six layouts varying in distance, colour and entrance orientation. Then, using RFID tags, we tracked drifting across three layouts with the same inter-hive distance but different designs: visually similar hives, hives with opposite entrance orientation, and hives painted with distinct colours. Forager traffic was lowest in the visually similar layout during the first two weeks of monitoring, which is consistent with greater disorientation in the absence of clear visual cues. Hive position was a key driver of drifting behaviour across all layouts, with bees from edge hives drifting considerably less than those from inner hives. Drifting decreased considerably in hives with different colours (37.6%) and hives with entrances in opposite directions (48.1%), compared to similarly looking hives with entrances in the same direction (59.5%). Therefore, our findings highlight practical low-effort strategies for stingless beekeepers to reduce forager loss, pathogen spread, and productivity losses.

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Dietary macronutrients influence the gut microbiome and FA1PI, a non-invasive marker for GI health, in zoo-managed maned wolves (Chrysocyon brachyurus)

Bragg, M.; Muletz-Wolz, C. R.; Freeman, E. W.; Songsasen, N.

2026-08-20 zoology 10.64898/2026.08.10.743908 medRxiv
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The maned wolf (Chrysocyon brachyurus) is a near-threatened canid species that suffers from gastrointestinal (GI) disease under human care. While the cause remains poorly understood, recent studies report that altered gut microbiota is linked to GI disease in the domestic dog. The goal of this study was to describe the relationship between gut bacteria and environmental factors, GI health, short chain fatty acid (SCFA) peaks, and genetic relatedness in maned wolves. Fresh fecal samples were collected twice from wolves (first collection n = 29; second collection n = 25) housed in six facilities in the United States. Fecal alpha-1 proteinase inhibitor (FA1PI), a biomarker for GI health in canids, and SCFA peaks were quantified. Information on diet, housing group and history of GI disease or inflammation was provided by the zoological facility for each wolf. We characterized gut microbiota using 16S rRNA gene amplicon sequencing with qPCR abundance corrections. We found that dietary fiber gross energy (GE), protein GE, and number of daily produce items influenced gut microbiota. Additionally, there was a negative relationship between dietary fiber GE and Fusobacterium sp. abundance, corroborating previous findings linking fiber to altered gut microbiome composition in canids. Lastly, fiber GE was negatively correlated with FA1PI, connecting fiber to GI health in the maned wolf. Findings from this study suggest that increasing dietary fiber GE changes the gut microbiome and may improve GI health in the maned wolf, highlighting important management decisions that can be considered to maintain a healthy zoo-managed maned wolf population. IMPORTANCEFindings from this study are important because gastrointestinal disease is a common health concern for maned wolves under human care, and the causes are not well understood. The current study found that diet, especially the amount of fiber gross energy, can affect gut bacteria and may support better gastrointestinal health. Diet alterations could be a practical tool for zoos to support management of gastrointestinal health issues in maned wolves. These findings also show the importance of carefully managing diets for a near-threatened species, since better gastrointestinal health may improve overall health and well-being and support reproduction. More research is needed to determine the best amount and type of fiber, but our results provide foundational information for improving care and supporting healthy zoo-managed maned wolf populations.