Hydrobiologia

Quagga mussels (Dreissena rostriformis bugensis) are among the most impactful invaders in freshwaters of the Northern Hemisphere. As filter-feeders, they can reduce harmful algal blooms (HABs), but their effects are expected to be dependent on cyanobacteria species and water temperature. However, conclusive studies on these traits and their combination are lacking. Here, we combined laboratory experiments with an analysis of long-term data from a temperate shallow lake 10 years before and after quagga mussel invasion, respectively. We tested the hypotheses that quagga mussel filtration rates in the laboratory would 1) vary among common cyanobacteria species and 2) decrease above a critical temperature. Regarding the field data, we expected that 3) quagga mussels can reduce the summer biovolume of palatable cyanobacteria, but that 4) this effect disappears above a critical temperature. Our results support all four hypotheses. In laboratory experiments, Dolichospermum flos-aquae was classified as palatable to quagga mussels, while Aphanizomenon flos-aquae, Anabaenopsis elenkinii and Microcystis aeruginosa were less-palatable cyanobacteria. Filtration rates decreased above 28.9{degrees}C (CI: 27.6-30.2{degrees}C) with mussels dying at 32{degrees}C. Our long-term lake data show that cyanobacteria biovolumes were lower after quagga mussel invasion, but only below 27.7{degrees}C (CI: 26.9-28.4{degrees}C), confirming a critical thermal window for quagga mussel filtration. Global warming will therefore facilitate HABs by increasing the growth rates of cyanobacteria and reducing the filtration rates of quagga mussels above critical summer water temperatures, which are increasingly being reached in invaded lakes. This critical thermal window must be considered when making HAB predictions. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=93 SRC="FIGDIR/small/707163v1_ufig1.gif" ALT="Figure 1"> View larger version (19K): org.highwire.dtl.DTLVardef@175851eorg.highwire.dtl.DTLVardef@76a481org.highwire.dtl.DTLVardef@12a3965org.highwire.dtl.DTLVardef@11e3e7d_HPS_FORMAT_FIGEXP M_FIG C_FIG

Many commercially exploited fish stocks have declined over the last few decades. It is therefore essential to identify natural populations and understand local adaptation for sustainable management. Salinity is a key environmental factor shaping local adaptation, and adaptive trait divergence often occurs at the egg and larval stages. The strong salinity gradient in the brackish Baltic Sea has driven rapid adaptation in multiple taxa. The Eastern Baltic cod (Gadus morhua) has adapted to low salinity with buoyant and tolerant eggs and larvae, but the stock has declined both in abundance and geographical range during the last decades. The main reproduction area of this stock is in the Bornholm Basin (ICES subdivision (SD) 25) in the southern Baltic Proper. Cod in this area, however, exhibit stunted growth and small body sizes. In contrast, large and healthy cod in reproductive condition have been observed in the [A]land Sea in the northern Baltic Proper (SD 29), raising the question of whether these fish represent a locally adapted population capable of successful reproduction in the lower salinities (5-10 psu in the northern Baltic Proper (SD 27, 29 and 32). Here, we experimentally assessed egg and yolk-sac larvae survival across salinities, egg size, egg and larval neutral buoyancy and egg survival on sediment, to test whether northern ([A]land) cod show adaptation to low salinity at early life stages as compared to southern cod. Mortality of larvae increased with decreasing salinity in cod from both areas, with the lowest survival at 7 psu. At 9 psu, more than 50% of northern cod larvae survived, suggesting that development could occur in SD29. Egg size and buoyancy were similar between northern and southern cod, and eggs and larvae were negatively buoyant, sinking under local salinity conditions. Nevertheless, the eggs survived and hatched well on sediment, indicating potential for demersal spawning. Our findings show no strong evidence of adaptive divergence to lower salinity in northern cod; however, their ability to tolerate sediment contact at early life stages suggests that Eastern Baltic cod may reproduce outside their historical spawning grounds.

Astyanax Baird & Girard, 1854 is a widely distributed and species-rich genus of Acestrorhamphidae, whose abundant populations in Neotropical basins play a crucial ecological role at the trophic level. Taxonomic uncertainties persist within the genus, as seen in Astyanax sp. (formerly designated as A. fasciatus) from the Magdalena basin in Colombia. Concerns about its genetic status are heightened due to ecological threats posed by hydroelectric dams, from habitat loss to river connectivity. We isolated and characterized 17 microsatellite loci to assess the population genetics of this species in a broad sample from the middle and lower sections of the Cauca River, now interrupted by the Ituango dam. Furthermore, a multidisciplinary approach integrating phylogenetic analyses of mitochondrial (COI) and nuclear (rag2) markers with geometric morphometric analyses was employed to evaluate potential cryptic diversity within Astyanax sp. Microsatellites revealed two genetic groups in the studied area, strongly supported as distinct lineages by phylogenetic analyses. Unexpectedly, one of these lineages of Astyanax sp. was recovered in an unresolved clade with samples of A. microlepis and allopatric samples of A. viejita from the Maracaibo Lake basin. Each genetic group showed high genetic diversity, but also evidence of recent bottleneck events and significant-high values of inbreeding. Morphometric analyses provided evidence of significant phenotypic differentiation among A. microlepis, Astyanax sp. 1 (Asp1), and Astyanax sp. 2 (Asp2). Morphological patterns ranged from the robust profile of A. microlepis to the streamlined shape of Astyanax sp. 2 (Asp2), with Astyanax sp. 1 (Asp1) displaying intermediate traits and localized differences in head length and fin placement. Statistical support from permutation tests and a high overall classification accuracy (95.65%) underscore the existence of distinct morphospecies, suggesting that phenotypic differentiation is well-established, despite the complex evolutionary history of the group. This study suggests the presence of cryptic diversity within Astyanax sp. and provides valuable genetic information for the conservation and management of their populations in the Magdalena basin.

Artificial pond construction is widely used in wetland restoration, yet biodiversity outcomes depend strongly on design and subsequent management. We tested how different regimes (grazing, mowing, and no management) influence habitat structure, water conditions, and aquatic macroinvertebrate diversity in newly excavated experimental ponds within an eutrophic wetland in South Moravia (Czechia). Across four focal groups (Mollusca, Odonata, Coleoptera, Heteroptera), we observed rapid colonisation of the newly built ponds. Species richness and densities rose during early development, dropped after drying events, and then partially recovered, indicating repeated "resetting" of communities under fluctuating hydrology. Periodic drying also prevented fish stock establishment. Management significantly affected species composition and both grazed and mowed ponds displayed higher densities (abundances) than controls, but differed only slightly in terms of species richness. The grazed ponds were characterised by high sunlight exposure, reduced reed dominance, and trampling-generated high littoral heterogeneity. These ponds showed highest numbers of taxa adapted to shallow and warm waterbodies, muddy substrate, semiaquatic microhabitats, or newly emerged and disturbed habitats. The mowed ponds promoted dense submergent vegetation, supporting Odonata representation and other taxa requiring aquatic vegetation. The control ponds remained highly shaded by high-grown reed, organic-matter rich, hosting a set of taxa tolerant of low-light, low-oxygen conditions. At the wetland scale, multiple small ponds increased overall diversity through high between-pond heterogeneity. Our results highlight that pond construction alone is insufficient for wetland restoration: follow-up long-term management regimes, especially extensive grazing, can rapidly generate structural heterogeneity and sustain diverse aquatic invertebrate assemblages in eutrophic wetlands.

Noise pollution is an increasing threat to soniferous fishes, however, research on noise pollution impacts is limited to few species and rarely studied in situ. Red Drum (Sciaenops ocellatus) is an estuarine, fishery species that choruses during spawning. We tested predictions of the hypothesis that Red Drum alter sound production in response to vessel noise. We used passive acoustic monitoring in 2021 and 2022 at an estuarine inlet and Generalized Least Squares (GLS) models to assess vessel sound exposure levels over time (SEL) and other abiotic parameters on Red Drum chorus SELs. GLS models of daily crepuscular choruses indicated a >5% reduction in proportion to crepuscular vessel noise in 2021. GLS models testing influence of abiotic variables and prior vessel noise, predicted reduced chorus SELs proportional to prior noise SEL: ca. 5% and 3% of vessel SEL in 2021 and 2022, respectively. In some instances, SEL during vessel noise was lower than fish chorus SEL immediately prior, indicating instances when fish reduced chorus amplitude during vessel noise or fled the immediate area. In cases when SEL of vessel noise periods exceeded fish calling SEL immediately prior, it is not known if fish modulated calling amplitude because the portion of combined vessel noise and fish chorus amplitude from vessels is unknown. In peak spawning season (September-October) vessel noise was frequent, detected in >31% of recordings in both years and up to 100% of recordings on some dates. Observations of disrupted choruses and high vessel noise prevalence suggest spawning behavior may be impacted by abundant vessel noise.

Hypanus brevis (Garman, 1880) and Hypanus dipterurus (Jordan & Gilbert, 1880) are currently considered as a conspecific lineage of the "diamond stingray" from the Eastern Pacific. This taxonomic group has been the subject of nomenclatural disputes for about 145 years. To clarify the historical confusion surrounding this lineage, we employed an integrative taxonomic approach using specimens from the Eastern North and Eastern South Pacific (ENP and ESP). The genetic results, based on single and multilocus mitochondrial analyses, revealed a distinct evolutionary unit in the ESP. While morphological analyses detected subtle differences between ENP and ESP specimens, most characters exhibited significant overlap (e.g., disc shape, dentition patterns, body coloration), suggesting low evolutionary divergence. A calibrated molecular clock analysis estimated this divergence at approximately 3.09 Ma. In accordance with Garmans (1880) original description based on specimens from Paita (northern Peru), we formally resurrect H. brevis from synonymy with H. dipterurus. Our findings suggest an anti-tropical speciation pathway, with core populations of H. brevis and H. dipterurus restricted to the temperate waters of the ESP and ENP, respectively. Notably, a single, fixed COI haplotype was detected in all H. brevis specimens from the north-central Peruvian coast. This result may indicate a severe bottleneck event, raising concerns about the genetic health and long-term viability of this vulnerable species. Finally, we analyzed historical fishery data of H. brevis to infer its current population status, suggesting targeted conservation measures and precautionary management to prevent further loss of genetic diversity.

Tropical coral reef ecosystems worldwide are being impacted by combined pressures of climate change and human activities that introduce large quantities of nutrients and sediments into coastal areas. In this context, phytoplankton represent a critical link between dissolved inorganic nutrients and coral reef food webs, yet their role in these ecosystems remains understudied. We investigated ecological responses of the summer phytoplankton community of Shiraho Reef (Ishigaki Island, Okinawa, Japan) to nutrient enrichment using field-based microcosm experiments under natural light and temperature conditions in September 2022 and 2023. Treatments included single and combined additions of nitrogen, phosphorus, and silicon. Chlorophyll a (Chl a) concentrations increased after three days under combined nutrient conditions, whereas single-nutrient additions produced limited responses, indicating a strong co-limitation by nitrogen and phosphorus in the reef. Analysis of size-fractionated Chl a revealed shifts from picophytoplankton that typically dominate tropical oligotrophic ecosystems toward larger groups supported by enhanced nutrient availability. Our results show short-term impacts of nutrient enrichment events on phytoplankton size structure and biogeochemical cycling in coral reefs, and highlight the importance of pelagic processes in coral reef carbon dynamics under nutrient-enrichment.

Sockeye salmon (Oncorhynchus nerka) is a traditional object of fishery in the northern Pacific, but its island populations now face emerging threats from territories development and escalating risks of unregulated fishing. The present study aims to assess the current status of Kuril island populations associated with the biogeographical processes in the past. We analyzed diversity distribution of the D-loop sequence and three mtSNPs localized in the Cytb and COI genes in sockeye salmon populations across the North Pacific. mtDNA variants were grouped into two distinct lineages: haplogroups 10T and 13T. Their distribution suggests an Asian origin for the 10T lineage and a North American origin for the 13T haplogroup. Testing the biogeographical scenarios support recurrent postglacial expansions of North American strains into the southernmost territories of the Asian range during the last two glacial cycles. Concurrently, during the Holocene transgression, there were two centers of sockeye salmon radiation in Asia associated with the refugium in the Kamchatka River basin and a minor cryptic refugium in the Hokkaido region. We also propose an island bridge hypothesis to explain dispersal of 10T-lineage from the Kamchatka River basin into Cook Inlet and Alaska Peninsula watersheds via the Aleutian Islands.

Sea turtles exhibit environmental sex determination and face risks of over-feminization, heat-induced embryonic failure, and hatchling mortality due to rising global temperatures. Mitigating these impacts of climate change may necessitate interventions to reduce sand temperature. One proposed strategy is to irrigate nests with seawater, but uncertainties exist regarding turtle egg tolerance to saline nest sand. To test the hypothesis that sea turtle embryos can tolerate a regimen of irrigation with seawater at a management-relevant scale, we investigated the impact of two levels of large-scale irrigation using cooled seawater on green turtle nests and embryos, assessing the effects on important nest environmental factors and developmental success. Irrigation which simulated 200 mm of rain reduced the temperature in clutches by up to 5.6 {degrees}C (1.34 {+/-} 0.10 mean {+/-} SD) without adversely affecting clutch oxygen levels, sand water potential, or sand moisture content, but our irrigation regimens resulted in very low hatching success (1.5%). However, late-stage embryonic mortality predominated, suggesting that early embryos may have an unexpected tolerance to saline sand and increasing our understanding of sea turtle resilience to seawater irrigation. The observation that younger embryos may be less susceptible to seawater-associated mortality than mature embryos near hatching further informs the limitations and potential applications of seawater irrigation as a management strategy.

Benthic remineralization of organic matter is key to carbon and nutrient cycling, influencing both long-term carbon storage in the sediments and the release of nutrients that support primary production in the water column. With its multiple forms and ages of sea ice, Nares Strait in the Canadian Arctic offers a unique opportunity to address the knowledge gap of variability of benthic remineralization rates along a natural sea ice gradient. Here, we incubated sediment cores in different locations in Nares Strait characterised by different sea ice conditions ranging from first-year ice to multi-year ice, to measure oxygen and nutrient fluxes. To identify potential drivers, we measured environmental variables, identified macrofauna and calculated a suite of taxonomic and functional diversity indices. Our analyses showed that benthic fluxes varied significantly between the northern and southern regions of Nares Strait. The presence of deposit feeders and sea ice cover (number of days since ice-free) were the main drivers in benthic fluxes, explaining 22.6% and 13.9% of the benthic flux variation, respectively. Overall, functional diversity was a better predictor of benthic fluxes than taxonomic diversity, indicating its primary importance in controlling benthic ecosystems functioning. Our results reveal that, from a benthic biogeochemical point of view, Nares Strait seems to be dissected into two main sub-regions: (i) a permanently and highly sea ice-covered area north of Kennedy Channel, resembling deeper regions of the Arctic Ocean and (ii) a seasonally ice-covered area between the North Water Polynya and Kane Basin, where benthic fluxes values are equivalent to those reported in similar continental Arctic shelves. Consequently, the rapid functional shifts resulting from the ongoing decline in sea ice could enhance benthic remineralisation rates if deposit feeder were to become dominant in certain areas, reducing the role of the region and by extension, the Arctic, as a carbon sink.

Using linear inverse ecosystem modeling as a data assimilation tool, we compare spawning grounds of Atlantic and Southern Bluefin Tuna (ABT and SBT, respectively) based on results from field campaigns in the Gulf of Mexico (GoM) and eastern Indian Ocean off northwest Australia (Argo Basin). Both regions are warm, stratified, low-nutrient waters dominated by cyanobacteria (Prochlorococcus). Despite these similarities, the Argo Basin is more productive, with [~]1.5X higher net primary production and nearly 2X higher production of top trophic levels in the model (tuna larvae, planktivorous fish, and predatory gelatinous zooplankton). Higher primary production in the Argo Basin is mainly driven by higher N2 fixation and storm mixing of new nutrients in the upper and lower euphotic zone, respectively. Increased ecosystem efficiency (secondary production of top trophic levels / primary production) results from differences in plankton food web organization. In the GoM, protistan zooplankton are the direct consumers of nearly all phytoplankton production. In contrast, higher rates of herbivory by crustaceans feeding on nanophytoplankton combines with a higher impact of appendicularians on cyanobacteria to convert plankton production into larval tuna prey more efficiently in the Argo Basin. Despite similarities in the proportions of phytoplankton production mediated by cyanobacteria and other picoplankton in both systems, food web pathways to larval tuna and other planktivorous fish are substantially shorter in the Argo Basin. Our results highlight the impact of distinct zooplankton ecological niches on ecosystem efficiency and suggest a need for better inclusion of plankton food-web structure in models simulating climate impacts on fisheries production. HIGHLIGHTSO_LIDeveloped food web models of tuna spawning habitat (Indian Ocean & Gulf of Mexico) C_LIO_LISpawning habitats in the Argo Basin and Gulf of Mexico (GoM) are both oligotrophic C_LIO_LIArgo Basin had higher net primary production in part as a result of nitrogen fixation C_LIO_LIArgo Basin had higher rates of direct herbivory by metazoan zooplankton C_LIO_LIThis resulted in greater ecosystem efficiency in the Argo Basin. C_LI

Invasive round goby Neogobius melanostomus have advanced eastward through the state of New York and provinces of Ontario and Quebec over the past two decades and are approaching Lake Champlain, one of the largest lakes in North America. This manuscript describes international efforts to monitor round goby populations during 2021-2025 on (a) the southern approach to Lake Champlain via the Hudson River and Champlain Canal, and (b) the northern approach to Lake Champlain via the Saint Lawrence River and Richelieu River. Monitoring utilized environmental DNA (eDNA), backpack electrofishing, beach seining, benthic trawling, and viral hemorrhagic septicemia virus (VHSV) testing. In the Champlain Canal, round goby were captured as far north as the downstream side of the C1 dam (97 kilometers [km] from Lake Champlain) while eDNA detections occurred as far north as the upstream side of the C2 dam (90 km from Lake Champlain). In the Richelieu River, round goby were captured as far south as Saint-Marc-sur-Richelieu (82 km from Lake Champlain) while the southern-most eDNA detections occurred near the Canadian side of the international border (4 km from Lake Champlain). Water temperature influenced habitat usage of round goby in the Champlain Canal, with catch rates in near-shore areas declining at < 10 {degrees}C. All VHSV test results were non-detections at the mouth of the Richelieu River, while one positive and two inconclusive results occurred along the Champlain Canal. Together, these data have informed multiple mitigation measures and have implications for management of aquatic invasive species across North America.

Recently, an inventory of genes in phytoplankton was conducted through expeditions such as TARA Oceans. Approximately 1.5 million genes were identified, of which at least three-quarters have unknown function. Presently, a several research programmes are engaged in the sequencing of marine biodiversity, resulting in a rapid expansion of genomic databases. Access to the genomic sequences of these organisms will soon be readily accessible to the scientific community. Although analysing this data is promising, the characterization of genes or genomes, on the other hand, is progressing very slowly and remains a major challenge for scientists. The aim of this study was to use GWAS approaches to decipher genomic loci without a priori assumptions. The microalga Tisochrysis lutea was selected as a case study due to its economic importance and the extensive knowledge accumulated over the years. Particular attention was paid to pigment and lipid metabolism due to their high commercial value. To implement the GWAS approach, a collection of algal lineages was established (100 lineages) from available polyclonal strains (15 strains). This collection was then phenotyped under two different culture conditions. Of the 31 phenotypic traits investigated, 18 met the requirements for GWAS analysis. Concurrently, each algal lineage was genotyped by whole genome sequencing to inventory all genetic polymorphisms. A mixed model was applied, revealing 13 significant associations between phenotypic traits and alleles. These associations highlight previously unsuspected genomic loci that play a major role in pigment or lipid content. Genes identified at these loci may have a direct or indirect role in these metabolic pathways. Nevertheless, elucidating the molecular mechanisms of the associated genes remains limited without the implementation of functional approaches. Despite the complexity of the process, we conclude that the GWAS approach was effective for deciphering phytoplankton genomes, particularly for quantitative traits of interest. Ideally, this approach should be combined with other functional methods to progressively decode marine genomes.

Fishless lakes, critical drivers of biodiversity across freshwater landscapes, are becoming increasingly rare due to fish introductions. Although the impacts of fish introduction are well understood in high-elevation fishless lakes, their effects on fishless kettle lakes remain poorly understood. Many kettle lakes are disconnected from the surface water network and are therefore fishless. In this study, we examined how amphibian and zooplankton communities differ between fishless and fish-bearing kettle lakes by comparing 36 lakes in Quebec, Canada. Some kettle lakes are hydrologically connected to surrounding aquatic ecosystems, allowing natural colonization by fish. We therefore also evaluated how amphibian and zooplankton communities differ between connected and disconnected kettle lakes. Fish presence was associated with differences at each stage of the amphibian life cycle. Reproductive calls of adult amphibians were detected regardless of fish presence, indicating that reproduction occurred in all lake types. However, the presence of fish was associated with fewer amphibian egg masses and lower larval abundance, and the absence of salamanders at the larval stage. Small-bodied zooplankton were more abundant in fish-bearing lakes, while overall species richness was lower. In particular, Chaoborus americanus, a large top-predatory zooplankton species, was found exclusively in fishless lakes. In contrast to fish presence, hydrological connectivity had no significant effect on most communities, except for adult American toads, adult wood frogs, and mink frogs larvae, which responded positively to the interaction between fish presence and connectivity. Based on our results, we recommend avoiding fish stocking of kettle lakes to preserve essential reproductive habitats for amphibians, maintain refuges for sensitive zooplankton species, and safeguard the spatial heterogeneity that underpins landscape-scale biodiversity.

Neuroendocrine stressors can disrupt the brains redox equilibrium by generating high levels of reactive oxygen species (ROS) that lead to oxidative stress. The magnitude of the effect of neuroendocrine stressors on brain redox equilibrium can be influenced by many internal and external factors. To what extent the relationship between neuroendocrine and oxidative stress is modulated by an individuals stress coping style is only beginning to be understood. To explore this, we subjected proactive and reactive zebrafish to an acute novelty stressor and subsequently quantified changes in behavior and whole brain biomarkers of oxidative stress and antioxidants (DNA damage, total glutathione (GSH), glutathione ratio, oxygen radical absorbance capacity (ORAC), and superoxide dismutase (SOD). Stressed fish had significantly higher total glutathione, trends higher ORAC, DNA damage, and glutathione ratio, and trend for lower SOD levels compared to controls. In addition, individuals with a reactive stress coping style exhibited significantly higher levels of SOD and glutathione ratio, and a trend for ORAC compared to proactive individuals. From a principal component analysis, we also found that the reactive individuals had significantly higher PC1 scores (antioxidant axis) compared to the proactive, and a trend for stressed fish having higher PC1 scores than control. The oxidative stress axis (PC2) showed that the stressed fish had a significantly higher PC2 score relative to control fish. Our results show that neuroendocrine stress-induced disruption of redox equilibrium in the brain differs by stress coping style. Those with a reactive stress coping style have elevated antioxidant capabilities and capacities. Overall, our findings suggest that elevated reactivity to neuroendocrine stressors commonly seen in reactive stress coping styles may be mitigated through the glutathione buffering system and other antioxidants.

Uncontrolled carbon dioxide emissions from human activities contribute to ocean warming and acidification. These alterations in ocean chemistry threaten marine organisms, such as the true giant clam, Tridacna gigas, which is already imperiled due to overharvesting and habitat destruction. To gain an understanding of the physiological and molecular responses of T. gigas and its symbiotic dinoflagellates to ocean warming and acidification, we subjected juvenile individuals to different treatments simulating predicted seawater pH (7.6 and 8.0) and temperature (28{degrees}C, 30{degrees}C, 32{degrees}C and 34{degrees}C) levels for the next century. Juvenile giant clams were able to tolerate sustained exposure to temperatures of up to 32{degrees}C and pH as low as 7.6, while exposure to higher temperature (34{degrees}C), regardless of pH level, resulted in total mortality after a week. However, symbiosis was compromised even in the sublethal treatments, as indicated by the decrease in Symbiodiniaceae density and changes in symbiont gene expression. Symbionts significantly upregulated genes involved in splicing, translation, fatty acid metabolism, and DNA repair, which may constitute an adaptive response, while downregulating genes involved in photosynthesis and transmembrane transport, suggests impaired transfer of photosynthates to the host. These findings demonstrate the vulnerability of the juvenile T. gigas holobiont to heat stress, highlighting the critical importance of continued conservation and management alongside efforts to mitigate global changes in ocean conditions to safeguard this iconic marine bivalve. Summary StatementThis study investigates physiological and molecular responses of Tridacna gigas to seawater warming and acidification, providing insights into the potential future of endangered giant clam populations in a changing ocean.

Ongoing climate change will negatively impact tree populations unless they are able to acclimate to the changes in their local environment. Effective planning for climate adaptation management requires an understanding of the current state of local adaptation and physiological performance to assess whether populations are at risk of local extinction, to determine if seed movement is appropriate, and to select appropriate seed sources if intervention is needed. We established a new reciprocal transplant experiment (ACE, Adaptation to Climate and Environment) across a latitudinal gradient in North America to examine the impacts of warming on three bur oak (Quercus macrocarpa) populations across much of the species range. We established common gardens in Minnesota, Illinois, and Oklahoma with seedlings grown from seeds collected within 50 km of each of those locations from a total of sixty maternal families. We aimed to 1) assess local adaptation in each of the populations using survival and size as fitness metrics, and 2) evaluate physiological responses to different environments along the latitudinal gradient. We found that northern populations are maladapted to hotter climates as evidenced by their low survival, growth, and photosynthetic rates in the warmest common garden. The southernmost population had the highest survival rate, growth rate, and fitness of the three populations in the southernmost garden, providing evidence for local adaptation to the warmest site. However, conditions in the middle garden resulted in the highest fitness and best physiological performance for all populations. Growth and survival were correlated in the middle garden but were decoupled in the northern and southern gardens. This decoupling is likely due to stress associated with more extreme climates at the ends of the gradient that led to greater resource allocation to survival than to growth. Our results suggest that southern seed sources may perform well in warmer conditions in the north brought on by climate change, which has important implications for managers assisting broadly ranged tree species in adapting to climate change.

Pacific cod is a key species in North Pacific fisheries, and its stock assessment and management units are separated according to biological, geographical, and administrative information. Understanding the fine-scale genetic population structure of this species is crucial for effective management, particularly in regions such as Japan, where complex coastal geography and localised fisheries management prevail. Therefore, in this study, we analysed genome-wide single nucleotide polymorphisms (SNPs; 6,035 loci) in 496 individuals of Pacific cod sampled from 33 sites around the Japanese archipelago via genotyping by random amplicon sequencing-direct (GRAS-Di) analysis. Our analyses revealed three major genetic groups: Japanese Broad Range, Northernmost Honshu-Hokkaido (NHH), and Western Sea of Japan groups. These groups exhibited significant genetic differentiation (global FST = 0.056), distinct levels of nucleotide diversity, and group-specific genome-wide patterns of Tajimas D. Moreover, demographic history reconstruction based on whole-genome sequencing of three representative individuals revealed that each genetic group followed distinct demographic trajectories since the last glacial period. Importantly, the NHH group, related to the Mutsu Bay spawning aggregation and previously shown to exhibit strong natal homing in tagging surveys, was genetically identified for the first time in this study. Isolation-by-distance was observed across Japanese waters and within the Japanese Broad Range group, but not within the NHH group, suggesting that gene flow is generally restricted by geographic distance, except within the NHH group. To evaluate the potential for genetic stock identification, we extended a resampling-based cross-validation framework by incorporating outlier detection to assess marker selection strategies. Over 500 background SNPs were required to achieve >90% assignment accuracy for genetic stock identification, whereas only eight or more outlier SNPs showed comparable performance. These findings suggest that carefully selected SNP panels, particularly those including outlier loci, substantially improve stock discrimination. Overall, our study demonstrates the fine-scale genetic structure and demographic history of Pacific cod in Japanese waters and highlights the utility of practical marker strategies for enhancing the biological realism of fisheries assessment and supporting sustainable fisheries management.

The North American beaver (Castor canadensis) is an ecosystem engineer that strongly influences stream hydrology and ecosystems by constructing dams and canals. Previous research has shown that changes in the extent of beaver ponds and wetlands mapped using aerial photographs can serve as a proxy indicator of shifting regional abundance of beavers. In this study we investigated the use of freely available optical satellite data to measure changes in beaver pond surface water area on the 184 km2 Michipicoten Island in Lake Superior (Ontario, Canada) after a large decline in the beaver population that followed the arrival of grey wolves (Canis lupus). Inter-annual variability in pond extents was measured using sub-pixel mapping methods applied to the 30 m resolution Landsat (1985-2023) and 10 m Sentinel-2 (2016-2023) satellite records. After a > 90% decline in the number of surveyed beaver colonies between 2015-2018, beaver pond surface water area was reduced by 38-42% for ponds < 0.5 ha and by 48% for ponds < 0.1 ha by 2023. While these recent ponding reductions occurred during a period of above average precipitation, two previous smaller reductions were associated with low precipitation, water balance index, and Lake Superior water levels, suggesting that they were caused by drought and not beaver colony declines. While further testing is warranted, our results show that satellite-mapped changes in beaver ponds can provide a cost-effective metric for assessing large-scale population trends in the boreal zone.

Mixotrophy is emerging as a default nutritional strategy in phytoplankton but research seems so far isolated and mostly focussing on single phytoplankton groups or strains. Here we combined data from 24 oceanic and 22 freshwater strains - as well as results from other studies - to analyze phytoplanktons ability to utilize dissolved organic compounds and highlight potential influencing factors. The results emphasize that mixotrophy is ubiquitous in phytoplankton across functional groups and taxa isolated from various habitats, and not strictly dependent on light or nutrient deficiencies. Several factors such as taxonomic affiliation, temperature and growth phase can affect mixotrophic behavior but no consistent patterns have emerged regarding their effects. Hence, mixotrophic traits remain so far unpredictable. There is some indication that the strains origin - potentially through adaptation to habitat DOM availability - might predetermine phytoplanktons mixotrophic skills. For example, freshwater strains used overall more compounds than oceanic strains in our study and Ostreococcus exhibited a different use pattern depending on its origin. Nevertheless, many aspects of mixotrophy in phytoplankton - e.g. metabolic pathways - remain cryptic. By summarizing available knowledge and knowledge gaps, the present synthesis provides a guideline for upcoming research further exploring mixotrophy. Graphical abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=135 SRC="FIGDIR/small/703725v1_ufig1.gif" ALT="Figure 1"> View larger version (47K): org.highwire.dtl.DTLVardef@12ac311org.highwire.dtl.DTLVardef@6c98deorg.highwire.dtl.DTLVardef@1a837ddorg.highwire.dtl.DTLVardef@eb9b53_HPS_FORMAT_FIGEXP M_FIG C_FIG