EvoDevo

The placenta is defined as an organ that mediates the exchanges of nutrients, hormones, and other substances between the mother and embryo in viviparous animals. Its structure is diverse due to interspecific differences in fetal tissues and variation in the forms of maternal-fetal interfaces. Matrotrophic poeciliid teleosts, in which the embryo develops within the maternal ovarian follicle, possess functional placentas formed from maternal follicular and embryonic tissues. However, the physiological mechanisms underlying substrate exchange between mother and embryo remain unclear. Furthermore, although similar embryonic-maternal interfaces are observed in lecithotrophic poeciliids, it is unknown whether nutrient exchange occurs in these species. Therefore, this study investigated whether substance exchange occurs between the mother and embryo in the lecithotrophic teleost guppy (Poecilia reticulata) and identified the underlying physiological mechanisms. Histological analysis revealed that guppies have embryonic-maternal interfaces consisting of the maternal follicle and the embryonic yolk sac and pericardial sac. Additionally, tracking of 2,000 kDa fluorescein isothiocyanate-dextran injected into pregnant guppies confirmed its transport from mother to embryo. Immunofluorescence staining and electron microscopy revealed that substance transport from mother to embryo occurs via extracellular vesicles. Moreover, immunofluorescence staining and pharmacological experiments revealed exosome transport from embryo to mother. This study demonstrates that lecithotrophic guppies possess a functional placenta that mediates maternal-embryonic substrate transfer via extracellular vesicles. These findings provide fundamental insight into the evolution of placental strategies within the Poeciliidae family. Significance StatementViviparity, in which embryos develop within the maternal body, has evolved independently across diverse animal lineages. In lecithotrophic viviparity, embryos are thought to rely primarily on yolk-derived nutrients, with maternal-fetal exchange limited to small molecules such as gases. Here, using macromolecular tracer experiments and ultrastructural analyses in guppies, we show that large macromolecules (2000 kDa) are exchanged bidirectionally between mother and fetus via extracellular vesicles, despite the absence of direct tissue attachment. These findings challenge the conventional view of lecithotrophic viviparity and reveal a previously unrecognized mechanism of maternal-fetal communication. Our results suggest that extracellular vesicle-mediated exchange may represent a widespread and evolutionarily conserved strategy for maternal-fetal interaction across viviparous animals.

How morphology forms during development and changes during evolution remain major questions in biology. In vertebrates, teeth have long served as model systems to address these questions. In threespine stickleback fish (Gasterosteus aculeatus), repeated and convergent increases in pharyngeal tooth number in derived freshwater sticklebacks occur, suggesting increased tooth number is adaptive in freshwater environments, likely due to a diet of larger prey in freshwater. Whether changes in oral tooth patterning also occur in freshwater sticklebacks was unknown. Here we describe oral tooth number and patterning in a dense developmental time course of lab-reared ancestral marine and derived freshwater fish. We address three major questions. First, is the spatial sequence of early oral tooth formation invariant as we previously described for the pharyngeal dentition? Second, is oral tooth patterning in the upper and lower jaw sexually dimorphic, and if so, when during development does this dimorphism arise? Third, have freshwater fish evolved increases in oral tooth number? We find that (1) unlike the pharyngeal dentition, the oral jaw early spatial sequence is variable, especially in the lower jaw (2) sexual dimorphism in both oral jaws arises at the late juvenile stage with males having more teeth and (3) freshwater fish have evolved more oral teeth similar to the evolved tooth gain in the pharyngeal jaw. Together our morphological descriptions advance the stickleback oral jaw as a model system to study how morphology forms during development and evolves in nature.

Silk glands have been found in two groups of amphipods: the Corophiida and the Ampeliscidae. The silk glands in Ampeliscidae, however, have yet to be examined in detail. Here we report, for the first time, the morphology and distribution of pereopodal glands in the Ampeliscidae, in non-thread producing Synopiidae, and in the Paragammaropsidae. In the Ampeliscidae we found two gland types distributed throughout all pereopods which have the ability to create threads. Pereopods three and four have additional silk extrusion morphology at the tip of the dactylus in which silk is transformed into semi-cylindrical threads used for building domiciles. Synopiid outgroup species have one of the gland types but lack silk extrusion morphology. Using ancestral state reconstruction analysis, we find that glands in the Synopiidae are likely ancestral and hypothesize that silk glands in Ampeliscidae are derived from these ancestral glands. Silk-spinning pereopods in the Paragammaropsidae had similarities with both Corophiida and Ampeliscidae but had distinctions. Ampeliscidae silk-spinning systems bear surprising resemblance to the Corophiida which presents one to reconsider the taxonomic placement of Ampeliscidae and the origins of silk-spinning in amphipods. This is the first comprehensive study on the glandular systems of Ampeliscidae, Synopiidae, and Paragammaropsidae using advanced microscopy, providing pertinent morphological data to the study of arthropod silk gland evolution and complex traits.

The hallmark of sessile adult ascidians is a vase-like shape with a single oral and atrial siphon. Ciona, however, develops two atrial siphons after metamorphosis, which subsequently fuse into one. The mechanisms underlying this fusion are unknown. This study suggests that Hox2 controls this process. Hox2-knockout animals using Transcription-Activator-Like Effector Nuclease (TALEN) retain two atrial siphons throughout their lives. During normal fusion, epidermal cells between the siphons flatten along the anterior-posterior axis. This cellular flattening does not occur in Hox2-knockout animals, suggesting that the shape change in the epidermal cells produces tension, allowing the atrial siphon openings to converge at the midline for fusion. Hox2-knockout animals lack cupular organs, which are suspected hydrodynamic sensors in the internal epithelium of the fused atrial siphon and on the sperm duct. Among several knockout attempts, atrial siphon fusion was reproduced by only one TALEN pair, suggesting that this phenotype is driven by a mutation having a broader effect than those abolishing protein function. Many ascidians, unlike Ciona, develop a single atrial siphon shortly after metamorphosis. Our findings suggest that a phylogenetically conserved gene, Hox2, establishes this group-specific atrial siphon formation mechanism in Ciona.

Brown algae evolved independently from animals, land plants and other algae, and we know very little about the spatio-temporal dynamics of their embryogenesis. Here, we used time-lapse, bright-field microscopy to study cell division and lineage development during early embryogenesis in the kelp Saccharina latissima, a large brown alga. We discovered a radical change of cell identity as early as the 4-cell stage: after fertilization, the zygote underwent two or three unequal cell divisions before the basal cell - that closest to the maternal tissue - stopped dividing and radically differentiated into a hyperpolarized cell, the rhizoid, which anchors the embryo to the substrate. RNA-seq analysis showed that differentiation of rhizoid cells was preceded by expression of 130 basal cell-specific genes. Phylostratigraphic analysis further revealed that more than 40% of these basal cell-specific genes appeared after the emergence of the brown algae group, and their functions are largely unknown. By contrast, the apical cell predominantly expressed more ancestral, metabolism-related genes, and it continued to divide to produce the long, blade-shaped thallus of the alga. The early and radical nature of cell differentiation in Saccharina embryos, combined with differential gene expression from various evolutionary periods, highlights the unique mechanisms of embryogenesis of this alga.

Cnidae are explosive harpoon-like organelles localized within stinging cells, or cnidocytes, of the phylum Cnidaria (jellyfish, hydroids, sea anemones, and corals). These unique Golgi-derived vesicular structures define the phylum and are prominent examples of an evolutionary cellular novelty. While recent studies have focused on the developmental specification and regulation of cnidocytes more broadly, less is understood about gene expression patterns, structural variations, and toxin repertoires within distinct cnidae subtypes. Here, we determine the transcriptional profile of two major cnidae subtypes in the sea anemone Nematostella vectensis, nematocytes and spirocytes, using the cnidae-specific structural family of proteins called minicollagens. We first define the in vivo expression patterns for three known and three uncharacterized minicollagen orthologs. We show that four minicollagens are broadly expressed throughout ectodermal cnidocytes in developing larvae and primary polyps while two others are restricted to tentacular cnidocytes. Leveraging whole adult scRNA-seq data and two novel transgenic reporter lines, we then demonstrate that the tentacle-restricted cnidocytes are developing spirocytes that are distinguished by expression of the minicollagen NvNcol5. To deepen our analysis of cnidocyte gene expression, we used a customized RNA-FACS-seq pipeline to determine global transcriptional differences between these two subtypes. This approach identified a suite of differentially expressed genes, illuminating spatial and temporal gene expression dynamics across both developing nematocytes and spirocytes. Altogether, our experiments provide fundamental and novel insights into the specialization of cnidarian stinging cells while establishing a rich set of resources for further investigation.

Corals form important ecosystems that serve as habitat for numerous marine species. Being sessile, adult corals are exposed to changing environments without the means to relocate. Species dispersal is therefore restricted to the motile larval lifestage. How do microscopic larvae achieve reliable dispersal and conquest of novel habitats under time pressure and unpredictable environmental conditions? Here we show an unexpected diversity of behaviors in the cold-water coral Lophelia pertusa. Anatomical and behavioral changes of coral planula promote a change from neutral, passive buoyancy in the dispersal phase, to active swimming and search behavior during competency. As lipids are metabolized and sensory abilities develop, the coral larvae drastically change their motility patterns. Comparative analysis with a poorly dispersing, lecithotrophic anthozoan larvae reveals that developmentally timed sensory integration is conserved between species, but the behavioral modes and sensory responses are adapted to their particular ecology.

The morphogenesis of the optic cup provides a robust system for studying how two apposed epithelial monolayers with distinct properties fold and stretch in a coordinated manner to form the primordial eye. While much research has been conducted on the temporal dynamics of retinal neuroepithelium invagination, the spatial organization and stretching of the retinal pigment epithelium has received less attention. The fish species Astyanax mexicanus offers a unique model to examine the mechanisms of optic tissue morphogenesis through a comparative lens, as it exhibits natural variation in eye development between its river-dwelling and cave-adapted morphs. Using quantitative 3D imaging of optic cups from both morphs, we found that RPE morphogenesis involves transient, graded, and anisotropic cell stretching that patterns the epithelium during optic cup shaping. Analyses of RPE nuclear spacing and cell morphology showed that tissue stretching gradually increases along the proximo-distal axis, suggesting maximal tension in the elongated distal RPE cells aligned along the optic cup meridians. Furthermore, nuclear volumes and apical surface areas of RPE cells scaled spatially along the same axis, independently of endoreplication. In the cavefish natural mutant, RPE expansion was delayed by over six hours and proximal stretching exhibited altered isotropy, indicative of disrupted temporal coordination and suggesting modified mechanical constraints. These results demonstrate that RPE morphogenesis is a highly heterogeneous process from a spatiotemporal perspective, offering new insights into the study of the biomechanical principles of eye development in vertebrates. Summary statementThis study reveals the emergence of cell morphology gradients within the retinal pigment epithelium during morphogenesis of the eye in two distinct populations of the same species of fish.

Coral reefs are constructed by colonial cnidarians whose survival depends on the coordinated growth and physiological integration of thousands of interconnected polyps. While coral skeletons have been extensively studied, the internal three-dimensional organization of coral tissues remains poorly resolved, limiting our understanding of how reef-building corals function as integrated modular organisms. In this study, we established a contrast-enhanced X-ray tomography (XRT) workflow for decalcified coral tissues, enabling detailed visualization and quantitative comparison of internal polyp architecture across four reef-building species with distinct colony forms: Acropora cervicornis, Acropora millepora, Montipora capitata, and Pocillopora damicornis. Importantly, this methodology resolved previously inaccessible patterns of tissue organization and structural connectivity among neighboring polyps. The two Acropora species shared a conserved axial - radial organization but differed in mesenterial morphology, whereas M. capitata exhibited complex, entangled mesenterial networks that connected both neighboring and distant polyps. In contrast, P. damicornis displayed superficial connectivity restricted to the coenosarc. Together, these results suggest that internal tissue architecture is an evolutionarily flexible trait, shaped by ecological and developmental pressures rather than strictly by shared ancestry. Our XRT workflow thus provides a new comparative framework for understanding how corals function as integrated living colonies.

BackgroundDuring embryonic development and regeneration, the growth of any organ must be tightly regulated in order to achieve their optimal final size and become fully functional. Freshwater planarians, with their remarkable plasticity and ability to regenerate any part of their body based upon the presence of adult pluripotent stem cells, provide an ideal model to study how the final organ size is regulated during this process. Also, the fact that planarians are constantly growing and degrowing depending on culture conditions, allows us to study how the size of the different organs is determined under homeostatic cell renewal. ResultsHere, we investigate the role of Smed-pctk-1, a cyclin dependent kinase that belongs to the PCTAIRE subfamily of CDKs, which remains largely understudied. Functional analyses show that Smed-pctk-1 silencing disrupts the normal size of the cephalic ganglia and results in an overgrowth of the eyes both in homeostatic and regenerating planarians. The increase in eye size correlates to an increase in the number of both progenitor and differentiated eye cell types. Phototaxis behavioral assays reveal that Smed-pctk-1 RNAi planarians exhibit a precocious sensitivity to light. ConclusionsOverall, our findings identify Smed-pctk-1 as a key regulator of eye and neural size in planarians, highlighting its contribution to the mechanisms that control organ growth during both regeneration and homeostasis.

Conserved dorsoventral patterning systems have been proposed as evidence for a common evolutionary origin of centralized nervous systems in Bilateria, yet functional evidence outside vertebrates and arthropods remains limited. Here, we investigated the role of pax6 in the annelid Platynereis dumerilii using a mutant carrying a 61 bp deletion in the paired-domain coding region. Loss of pax6 disrupted ventral neuroectodermal patterning at 34 hpf, causing a shift in nk2.2 expression, narrowing of the nk6 domain, and downregulation of pax3/7, while msx expression remained largely unaffected. These early patterning defects were followed by selective neuronal abnormalities at 48 hpf, including displacement of TrpH-positive serotonergic cells and loss of posterior hb9-positive motoneuron domains. By 6 dpf, additional defects were observed in TrpH, ChAT, VAChT, and nk2.2 expression, accompanied by severe disruption of ventral nerve cord morphology and loss of the characteristic rope-ladder architecture. Together, these findings identify pax6 as a key regulator linking dorsoventral progenitor patterning, neuronal subtype specification, and nervous system morphogenesis in Platynereis. Our results provide functional evidence that the conserved dorsoventral patterning network plays an essential role in annelid ventral nerve cord development and support the view that important components of bilaterian nervous system patterning predate the divergence of major animal lineages.

Chondrichthyans (cartilaginous fishes) form the sister group to osteichthyans (bony fishes) and therefore occupy a key phylogenetic position for comparative studies of early vertebrate evolution. Despite their importance, chondrichthyan development remains understudied relative to established model systems such as mouse, chick, and zebrafish, in part because of limited embryo accessibility and the lack of standardized laboratory resources for rearing. Here, we present the epaulette shark Hemiscyllium ocellatum, a small, oviparous shark as a tractable laboratory system for studying shark development. We provide an overview of epaulette shark husbandry requirements and generate a comprehensive micro-computed tomography imaging series spanning embryonic development through hatching. This dataset provides a three-dimensional anatomical atlas of development for a representative chondrichthyan species. By preserving whole embryos in three dimensions, micro-CT imaging enables developmental morphologies to be visualized at high resolution and in near-native anatomical context. Together with the recently published epaulette shark genome, this developmental atlas helps establish the Epaulette shark for comparative anatomical, developmental, and genomic studies.

Understanding how anatomical structures evolve requires disentangling the roles of integration and modularity in shaping morphological variation. The vertebral column, a serially repeated and regionally differentiated structure, provides a powerful system for investigating these processes. Here, we examine how vertebral morphology evolves in relation to whole-body elongation across the adaptive radiation of Lake Malawi cichlid fishes. We tested for evolutionary integration between the precaudal and caudal domains, as well as assessed the contributions of vertebral count, centrum shape, and intervertebral spacing on body elongation. We find strong evolutionary integration between precaudal and caudal vertebral shape, with both vertebral shapes varying along shared axes of multivariate shape change. Despite this, precaudal and caudal vertebral counts evolve independently, indicating a decoupling between the evolution of identity and morphology. Whole-body elongation is significantly associated with coordinated changes in vertebral and rib morphology, including proportional increases in centrum size, posterior displacement of neural and haemal spines, and increased rib curvature. In contrast, centrum elongation and intervertebral spacing do not independently explain body elongation beyond vertebral counts. These results demonstrate that body elongation in cichlids necessitates integrated, multivariate changes in axial morphology. Our findings highlight the importance of morphological integration in facilitating coordinated evolutionary responses in anatomical systems.

The evolution of flippers for wing-powered diving in penguins is a striking example of tetrapod limb specialization. The modern penguin flipper is structurally reinforced by a characteristic dorsoventral flattening of the long bones accompanied by a reduction in distal forelimb musculature, features which emerged convergently in flightless diving birds and aquatic mammals. While an extensive fossil record informs the morphological sequence through which these changes occurred, the evolutionary pressures and developmental mechanisms underlying these modifications are unknown. We find that in avian and mammalian forelimbs, a flattened bone morphology only emerged in aquatic lineages that lost ancestral modes of locomotion, including in flightless diving birds, pinnipeds, and cetaceans. Using penguin embryos as an accessible model for investigating flipper development, we demonstrate that early patterning of forelimb musculoskeletal morphology is similar to that seen in forelimbs of non-aquatic birds. Instead, later modifications of gene expression and cell and tissue behaviors underlie flipper phenotypes. Thus, we find that in the early penguin forelimb, the initial cues that pattern the muscle do not differ from other avian species, however late embryonic changes in proliferation result in dramatic reduction of muscle. Likewise, forelimb bones in penguins initially have similar cross-sectional proportions to those in flighted birds. The shape of these bones is, however, remodeled late in embryonic development through a process that shares molecular hallmarks with bone ridge formation at tendon attachment sites. In these bones, ridge-forming tissue initiates at the ends of the bones (the epiphyses) and extends into tendon-like connective tissue along the lateral edges of the bone, widening the long bones along the anterior-posterior axis and producing a flattened bone. Using spatial transcriptomics and comparative genomic tools we determine that differentially expressed genes between the ridge-forming tissues and long bone cartilage are significantly enriched for signals of selection in the penguin lineage and that these genes may also be convergently evolving in marine mammals. Together, these data show that the evolution of musculoskeletal morphology in the penguin flipper occurred through expansion or novel deployment of molecular programs typically associated with tendon-attachment sites during late embryonic development.

The wings and legs of insects are both appendages that develop along a proximal-distal (PD) axis and likely share many underlying patterning mechanisms. Comparisons between the two appendages have been detailed in Drosophila melanogaster, a derived insect where both traits develop initially as imaginal discs. Here, we visualise and compare the expression of prominent PD developmental genes in the embryonic legs and larval wings of a lepidopteran species, Bicyclus anynana. We examine the domains of twelve leg gap genes that subdivide legs into distal, medial, or proximal domains, three morphogens, and two genes that refine the PD axis after initial specification. Our results reveal high spatial congruence in the order of PD gene expression between the two appendages. Notably, we observe a distinct loss of the medial domain in the Bicyclus wing compared to the leg, providing evidence for the evolutionary re-patterning of these structures. Comparisons with Drosophila further highlight conserved versus lineage-specific regulatory architectures. These findings suggest a deeply conserved PD patterning logic across Holometabola, while pointing to divergent mechanisms that likely facilitated the morphological innovation of butterfly wings.

Across the animal kingdom, metamorphosis transforms a free-swimming larva into a morphologically distinct juvenile, yet how conserved cellular processes are spatiotemporally coordinated to execute this rapid body plan switch remains poorly understood. Using the marine sponge Amphimedon queenslandica -- a member of one of the earliest-diverging animal phyletic lineages -- we characterise the cellular and morphogenetic events of the first six hours of metamorphosis. We show that metamorphosis proceeds through a tightly ordered sequence of events orchestrated by a stereotypic wave of epithelial infoldings that propagates from the basal to the apical pole within the first hour post-settlement. This wave acts as a morphogenetic pacemaker, spatially and temporally inducing subsequent cellular transitions, which include coordinated mucus secretion, cilia resorption, epithelial-mesenchymal transition (EMT), mesenchymal-epithelial transition (MET), transdifferentiation and targeted programmed cell death. Lineage tracing further reveals the stepwise transformation of larval cells at metamorphosis, with labelled epithelial flask cells transdifferentiating into internal archaeocyte stem cells via a transitory amoeboid cell state associated with EMT. These findings demonstrate that rapid metamorphosis comprises a spatially pre-patterned, stepwise program, and provide a cellular framework for understanding body plan transformations with broad implications for the evolution of metazoan metamorphosis.

Acropora spp. are the dominant reef-builders of the Indo-Pacific but are also amongst the most stress-sensitive corals. For these reasons, Acropora spp. have become the most studied of corals, two species (A. digitifera and A. millepora) often essentially serving as the basis for understanding molecular responses and processes across the sub-order Refertina and corals in general. The early development of these species has been well-characterised in terms of morphology and gene expression but as yet we have a limited understanding of how transcription is regulated during development. In "higher" animals (bilaterians) microRNAs (miRNAs) are critical regulators of gene expression but until now their involvement in coral development has not been investigated. Building on the existing developmental data for Acropora spp., we catalogued microRNAs (miRNAs) expressed during the early development of Acropora digitifera and profiled their expression in 21 stages from unfertilised eggs to 24h after treatment with a natural settlement cue (CCA chips). 157 miRNAs were recognised, many of which ([~]60%) were novel. These fell into three distinct groups, corresponding to three distinct developmental phases: (1) those present in eggs through to gastrulation (2) a larvally expressed group and (3) those expressed following settlement induction. Exposure of competent larvae to a natural settlement inducer resulted in major changes in the miRNA profile within 10 minutes, indicating that miRNAs may be particularly important in mediating the larva/polyp transition but are also likely to play important regulatory roles throughout early coral development in addition to possible roles in disease resistance.

Female reproduction is an energetically expensive process, so species evolve to balance survival with reproductive output. Many female organisms can temporarily pause their reproduction, including egg development, in response to physiological stress. The cellular mechanisms initiating and maintaining a stress-induced pause in oogenesis have been most extensively studied in Drosophila melanogaster. While the molecular control of paused oogenesis in response to starvation have been well characterized in flies, it remains unknown if these mechanisms are shared by other species with regulated pauses in oogenesis. Eusocial insects are characterized by a reproductive division of labor, with colonies of reproductive queens and sterile female workers. The social paper wasp, Polistes, has a dynamic dominance-based hierarchy for queen status. Worker Polistes are kept sterile by a combination of social and nutritional stressors. Here, we establish Polistes as a model to explore adult female reproductive plasticity. Through immunohistochemistry we have directly compared the Drosophila and Polistes ovarian structure and identified critical regions of the ovary in wasps that undergo regulated cell elimination during reproductive pause in flies. By comparing tissue structure, cell organization and rates of cell death between Polistes queens and workers we identified apoptosis as a key regulator maintaining worker sterility. Critically, this mechanism appears to be partially conserved with that in Drosophila. Finally, we find that changes in the timing and location of cell death in Polistes workers implicate oocyte identity and oocyte growth as additional potential regulators of temporary disruption of oogenesis.

Salamanders have outstanding regenerative abilities, which tend to decline in post-metamorphic life stages. Among various tissues, these amphibians can regenerate the brain from ependymoglia cells, an adult neural stem cell population. Ependymoglia cells are heterogeneous; yet, whether ependymoglia cell diversity underlies variation of regenerative capacity across brain regions and life cycle stages remains poorly studied. Here we present a cell type comparison of regeneration in the pallium (dorsal telencephalon) of pre- and post-metamorphic newts. We found that ependymoglia cells exist in a continuum of cell states ranging from active proliferation to quiescence across life cycle stages, with a deep quiescence state featuring expression of mammalian astrocyte genes. Ependymoglia cell state changes are associated with a slower onset of proliferation and neurogenesis in post-metamorphic animals. Comparisons with developmental and adult neurogenesis reveal that pallial ependymoglia cells retain regional restrictions but can override temporal fate restrictions in response to an injury, producing neurons that are normally born only in early development. We thus find that brain regeneration in newts is not a simple amplification of adult neurogenesis, but a distinct process where the initial molecular state of ependymoglia cells biases the relative proportions of regenerated neuron types. Our findings establish post-metamorphic newts as a system to study how astrocyte-like glial cells can activate a neurogenic program in response to brain injury.

Sexual processes in microbial eukaryotes are often cryptic, obscuring the diversity and evolutionary history of sex across major eukaryotic lineages. Within Amoebozoa, trophic-cell fusion has been associated with sexual development in distantly related taxa, but evidence from Tubulinea, one of the three major amoebozoan lineages, has been lacking, leaving a major gap in the known distribution of fusion-associated sexual development. Here, we combine long-term behavioral observations with transcriptomic analyses to uncover an extensive fusion-associated developmental program in the testate amoeba Arcella vulgaris. Individual trophic cells progressively fused with neighboring amoebae to form large multinucleate aggregates exhibiting coordinated movement and cytoplasmic streaming. Transcriptomic analyses identified a distinct meiosis-enriched state characterized by elevated expression of conserved meiotic genes, including DMC1, HOP1, HOP2, MER3, MSH5, REC8, ZIP4, and PCH2, together with genes involved in homologous recombination and chromosome maintenance. Morphologically similar fused aggregates occurred in both meiosis-enriched and meiosis-reduced transcriptomic states, revealing substantial molecular differentiation within the fusion process and suggesting a dynamic developmental continuum. The coordinated activation of conserved meiotic pathways strongly supports a role for trophic-cell fusion in sexual development. By extending fusion-associated sexual development to Tubulinea, our findings fill a major phylogenetic gap and establish the occurrence of this developmental phenomenon across all three major amoebozoan lineages. This broad phylogenetic distribution raises the possibility that fusion-mediated sexual development is an ancient and widespread feature of Amoebozoa and provides new insight into the evolution and diversity of sexual programs in microbial eukaryotes.