Back

Bid as a novel interacting partner of IRE1 differentially regulating its RNAse activity

Bashir, S.; Pal, D.; Banday, M.; Qadri, O.; Bashir, A.; Hazari, Y. M.; Hilal, N.; Altaf, M.; Fazili, K. M.

2020-02-19 cell biology
10.1101/572222 bioRxiv
Show abstract

Unfolded protein response is a dynamic signalling pathway, which is involved in the maintenance of proteostasis and cellular homeostasis. IRE1, a transmembrane signalling protein represents the start point of a highly conserved UPR signalling cascade. IRE1 is endowed with kinase and endoribonuclease activities. The activation of the kinase domain of IRE1 by trans-autophosphorylation leads to the activation of its RNAse domain. RNAse domain performs atypical splicing of Xbp1 mRNA and degradation of mRNAs by an effector function known as Regulated IRE1 Dependent Decay (RIDD). The regulation of the distinctive nature of the IRE1 ribonuclease function is potentially mediated by a dynamic protein structure UPRosome that is an assembly of a huge number of proteins on IRE1. Here, we reported that Bid is a novel recruit to UPRosome, which directly interacts with the cytoplasmic domain of IRE1. Bid controls the auto-phosphorylation of IRE1 in a negative manner where Bid overexpression conditions displayed reduced phosphorylation levels of IRE1 and Bid knockdown cells showed slightly enhanced IRE1 phosphorylation. This effect was reciprocated with JNK, a downstream target of IRE1. Our Insilico analysis revealed that Bid binding to IRE1 dimer averts its structural flexibility and thereby preventing its trans-autophosphorylation activity. We found that the effect of Bid is specific to the IRE1 branch of UPR signalling and competitive in nature. The highlighting observation of the study was that Bid stimulated a differential activity of the IRE1 RNAse domain towards Xbp1 splicing and RIDD. These results together establish that Bid is a part of the UPRosome and modulates IRE1 in a way to differentially regulate its RNAse outputs.

Matching journals

The top 15 journals account for 50% of the predicted probability mass.

1
International Journal of Molecular Sciences
453 papers in training set
Top 0.2%
10.2%
2
iScience
1063 papers in training set
Top 0.9%
6.9%
3
The FEBS Journal
78 papers in training set
Top 0.1%
4.9%
4
Scientific Reports
3102 papers in training set
Top 30%
4.0%
5
Cells
232 papers in training set
Top 0.7%
3.6%
6
Journal of Proteome Research
215 papers in training set
Top 0.8%
3.6%
7
PLOS ONE
4510 papers in training set
Top 43%
2.9%
8
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 3%
2.4%
9
Biochemical Journal
80 papers in training set
Top 0.1%
2.1%
10
Cell Reports
1338 papers in training set
Top 22%
1.9%
11
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
28 papers in training set
Top 0.1%
1.9%
12
eLife
5422 papers in training set
Top 41%
1.7%
13
International Journal of Biological Macromolecules
65 papers in training set
Top 2%
1.7%
14
Heliyon
146 papers in training set
Top 2%
1.7%
15
PLOS Genetics
756 papers in training set
Top 8%
1.7%
50% of probability mass above
16
Journal of Biological Chemistry
641 papers in training set
Top 2%
1.7%
17
Molecular & Cellular Proteomics
158 papers in training set
Top 1%
1.7%
18
Cellular Signalling
14 papers in training set
Top 0.1%
1.5%
19
Journal of Molecular Biology
217 papers in training set
Top 2%
1.5%
20
Genomics
60 papers in training set
Top 1%
1.3%
21
Journal of Biomedical Science
14 papers in training set
Top 0.1%
1.2%
22
Cell Communication and Signaling
35 papers in training set
Top 0.6%
1.2%
23
Frontiers in Genetics
197 papers in training set
Top 7%
1.2%
24
Life Science Alliance
263 papers in training set
Top 0.7%
1.2%
25
Gene
41 papers in training set
Top 1%
1.1%
26
PROTEOMICS
35 papers in training set
Top 0.6%
1.0%
27
Biochimie
23 papers in training set
Top 0.2%
1.0%
28
Cellular and Molecular Life Sciences
84 papers in training set
Top 0.4%
1.0%
29
Biomolecules
95 papers in training set
Top 1%
1.0%
30
Genes
126 papers in training set
Top 2%
1.0%