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A systematic protocol to identify 'clinical controls' for pediatric neuroimaging research from clinically acquired brain MRIs

Zimmerman, D.; Mandal, A. S.; Jung, B.; Buczek, M. J.; Schabdach, J. M.; Karandikar, S.; Kafader, E.; Gardner, M.; Daniali, M.; Mercedes, L.; Kohler, S.; Abdel-Qader, L.; Gur, R. E.; Roalf, D.; Satterthwaite, T. D.; Williams, R.; Padmanabhan, V.; Seidlitz, J.; White, L. K.; Sotardi, S.; Schmitt, J. E.; Vossough, A.; Alexander-Bloch, A.

2025-08-12 neuroscience
10.1101/2025.06.25.661530 bioRxiv
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Withdrawal StatementThis version of the manuscript has been removed owing to the presence of confidential information.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
PLOS ONE
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Top 8%
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6
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NeuroImage: Clinical
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3.4%
9
PLOS Biology
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Top 2%
2.6%
10
Pediatric Research
○ 21 papers in training set
Top 0.2%
1.8%
11
Scientific Reports
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1.8%
12
BMJ Open
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1.8%
13
BMC Medicine
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Top 2%
1.8%
14
Annals of Clinical and Translational Neurology
○ 34 papers in training set
Top 0.5%
1.4%
15
Frontiers in Neuroscience
○ 256 papers in training set
Top 4%
1.2%
16
eLife
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Top 64%
1.0%
17
Brain Communications
◐ 166 papers in training set
Top 3%
0.9%
18
Neurology
○ 50 papers in training set
Top 1%
0.9%
19
Frontiers in Neurology
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0.9%
20
The Cerebellum
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0.9%
21
Wellcome Open Research
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0.6%
22
Translational Psychiatry
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0.6%
23
NeuroImage: Reports
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0.6%
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Imaging Neuroscience
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Journal of Personalized Medicine
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26
Brain Imaging and Behavior
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27
Pediatric Neurology
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Top 0.2%
0.5%
28
Brain and Behavior
○ 43 papers in training set
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29
Psychiatry Research
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Cerebral Cortex
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"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.