Distinct characteristics of lymphoid and myeloid clonal hematopoiesis in Word Trade Center first responders
Esai Selvan, M.; Kuan, P.-F.; Yang, X.; Mascarenhas, J.; Klein, R. J.; Luft, B. J.; Boffetta, P.; Gümüs, Z. H.
Show abstract
Clonal hematopoiesis of indeterminate potential (CHIP) represents the presence of clonal somatic mutations in blood cells in otherwise healthy individuals. While CHIP is known to increase risk for hematologic malignancies and cardiovascular disease, its association with airborne carcinogens remains largely unknown. We investigated CHIP mutations in 9/11 World Trade Center (WTC) disaster responders (n=350), who experienced substantial exposure to a complex mix of airborne carcinogens. Ultra-deep whole-exome sequencing at 250X was performed on banked blood samples. We characterized CHIP mutations and their associations with clinical factors (age, ancestry, gender, body mass index, cardiovascular disease, stroke), laboratory parameters (peripheral blood counts), mental and cognitive assessments, exposure data, and HLA zygosity. Statistical methods included Fishers exact test, Wilcoxon rank sum test, and multivariate logistic regression. Findings were compared to unexposed controls (n=293) analyzed using identical methods. Among WTC participants, CHIP prevalence was 34.2%, with myeloid-CHIP (M-CHIP) at 16.2% and lymphoid-CHIP (L-CHIP) at 21.4%. M-CHIP prevalence correlated positively with age (p=0.02), smoking history (p=0.01), and lower platelet counts (p=0.03). The most frequent M-CHIP mutations were in DNMT3A, TET2, PPM1D, while L-CHIP mutations were in EEF1A1, DDX11 and KMT2D. Notably, DDX11 mutations were associated with lower Montreal Cognitive Assessment scores (p=6.57e-03). Comparison with unexposed controls demonstrated higher CHIP prevalence in WTC responders, particularly in those 55 or younger. Study highlights the potential utility of deep sequencing for CHIP detection with clinical, laboratory and exposure data to develop personalized risk-adapted screening programs for cancer and other CHIP-related conditions in individuals exposed to airborne carcinogens.
Matching journals
The top 9 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Peer victimization in adolescence alters gene expression and cytokine profiles during transition to adulthood 92%
- FINCA disease mouse model exhibits altered behaviour and immune response 92%
- Initial and ongoing tobacco smoking elicits vascular damage and distinct inflammatory response linked to neurodegeneration 90%
Similar papers in this journal
- Transient peripheral blood transcriptomic response to ketamine treatment in children with ADNP syndrome 91%
- The DNA methylation landscape of the human oxytocin receptor gene (OXTR): Recommendations for future research 91%
- DNA Methylation as a Potential Mediator of the Association Between Prenatal Tobacco and Alcohol Exposure and Child Neurodevelopment in a South African Birth Cohort 90%
Similar papers in this journal
- Short tandem repeat mutations regulate gene expression in colorectal cancer 92%
- Modeling of mitochondrial genetic polymorphisms reveals induction of heteroplasmy by pleiotropic disease locus MT:10398A>G 91%
- A Differential DNA Methylome Signature of Pulmonary Immune Cells from Individuals Converting to Latent Tuberculosis Infection 91%
Similar papers in this journal
- Pre-diagnosis blood DNA methylation profiling of twin pairs discordant for breast cancer points to the importance of environmental risk 92%
- Epigenetic clocks predict prevalence and incidence of leading causes of death and disease burden 92%
- An epigenome-wide analysis of DNA methylation, racialized and economic inequities, and air pollution 92%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.