Back

Human PrP E219K as a new and promising substrate for RT-QuIC amplification of human prion strains: a first step towards strain discrimination

Marin-Moreno, A.; Reine, F.; Jaffrezic, F.; Herzog, L.; Rezaei, H.; Quadrio, I.; Haik, S.; Beringue, v.; Martin, D.

2024-07-31 pathology
10.1101/2024.07.31.605973 bioRxiv
Show abstract

Prion diseases are fatal neurodegenerative diseases that affect mammals through the transconformation of a host protein, the prion protein (PrP), into a toxic and pathogenic conformer termed PrPSc. Until now, the diagnosis is only confirmed with a post-mortem histology study of the central nervous system. Among the methods to detect the etiological agent, in vitro amplification techniques have emerged as very sensitive, highly specific and rapid tools, even though some prion strains remain refractory or difficult to amplify. Here we report the use of a new recombinant substrate for Real-Time Quaking Induced Conversion (RT-QuIC), a natural polymorphism of human prion protein with a lysine at position 219 instead of a glutamic acid, PrP E219K. This substrate amplifies the six sporadic human strains responsible for Creutzfeldt-Jakob Disease (CJD) and the strain responsible for its variant form in a few hours and over a large dilution range of the seeds. Moreover, based on the lag time of the amplification reactions, the PrP E219K substrate allows to discriminate between sporadic and variant CJD strains, a first step towards an ante-mortem typing of the prion strain affecting a patient.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
EMBO Molecular Medicine
85 papers in training set
Top 0.1%
23.4%
2
Nature Communications
4913 papers in training set
Top 13%
13.0%
3
Scientific Reports
3102 papers in training set
Top 8%
8.7%
4
Acta Neuropathologica
51 papers in training set
Top 0.2%
4.1%
5
Brain
154 papers in training set
Top 1%
3.8%
50% of probability mass above
6
PLOS ONE
4510 papers in training set
Top 42%
3.2%
7
PLOS Pathogens
721 papers in training set
Top 4%
2.8%
8
Communications Biology
886 papers in training set
Top 4%
2.5%
9
Neuropathology and Applied Neurobiology
14 papers in training set
Top 0.2%
2.2%
10
PLOS Biology
408 papers in training set
Top 9%
1.8%
11
Science Translational Medicine
111 papers in training set
Top 2%
1.7%
12
Molecular Therapy
71 papers in training set
Top 2%
1.5%
13
EBioMedicine
39 papers in training set
Top 0.6%
1.2%
14
Emerging Infectious Diseases
103 papers in training set
Top 2%
1.0%
15
Analytical Chemistry
205 papers in training set
Top 2%
1.0%
16
Cells
232 papers in training set
Top 4%
1.0%
17
Archives of Biochemistry and Biophysics
11 papers in training set
Top 0.1%
0.9%
18
The Lancet Infectious Diseases
71 papers in training set
Top 2%
0.9%
19
eLife
5422 papers in training set
Top 52%
0.9%
20
ACS Nano
99 papers in training set
Top 3%
0.9%
21
European Respiratory Journal
54 papers in training set
Top 2%
0.8%
22
Life Science Alliance
263 papers in training set
Top 1%
0.8%
23
Journal of Biological Chemistry
641 papers in training set
Top 3%
0.8%
24
Heliyon
146 papers in training set
Top 5%
0.8%
25
International Journal of Biological Macromolecules
65 papers in training set
Top 3%
0.8%
26
Journal of Molecular Biology
217 papers in training set
Top 3%
0.8%
27
International Journal of Molecular Sciences
453 papers in training set
Top 14%
0.8%
28
npj Parkinson's Disease
89 papers in training set
Top 1%
0.7%
29
Advanced Science
249 papers in training set
Top 21%
0.7%
30
JCI Insight
241 papers in training set
Top 8%
0.7%