Genomic insight into the Comamonas kerstersii isolated from diarrheal patients in Bangladesh
NSU Genome Research Institute (NGRI), ; Hossain, M. M.
Show abstract
This study marks the first identification and genomic characterization of Comamonas kerstersii isolates from diarrheal patients in Bangladesh. C. kerstersii is a gram-negative opportunistic bacterium which has also been reported in several clinical samples, including urine, blood, stool, peritoneal liquid, sputum. We carried out the whole genome sequencing of three C. kerstersii isolates for the first time in Bangladesh with an aim to analyze genomic features in 3 different strains isolated from Bangladesh. Seven AMR genes, aph(6)-Id, aph(3)-Ib, mph(E), mph(F), msr(E), sul2, and tet(A), have been observed in all the strains. We identified several virulence factors including copper homeostasis genes, type IV pili and type VI secretion system. phage regions and IncQ1 plasmid were also detected.
Matching journals
The top 9 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Complete genome sequence of Xylella taiwanensis and comparative analysis of virulence gene content with Xylella fastidiosa 95%
- Description, taxonomy, and comparative genomics of a novel Thermoleptolyngbya strain isolated from hot springs of Ganzi, Sichuan China. 95%
- Inoculation with a microbe isolated from the Negev Desert enhances corn growth 94%
Similar papers in this journal
- Investigation of a night soil compost psychrotrophic bacterium Glutamicibacter arilaitensis LJH19 for its safety, efficient hydrolytic and plant growth-promoting potential 95%
- Distinctive Gene and Protein Characteristics of Extremely Piezophilic Colwellia 93%
- Population genomics of Vibrionaceae isolated from an endangered oasis reveals local adaptation after an environmental perturbation. 92%
Similar papers in this journal
- First complete genome sequences of Streptococcus pyogenes NCTC 8198T and CCUG 4207T, the type strain of the type species of the genus Streptococcus: 100% match in length and sequence identity between PacBio solo and Illumina plus Oxford Nanopore hybrid assemblies 95%
- Next generation taxonomy: integrating traditional species description with the holobiont concept and genomic approaches - The in-depth characterization of a novel Euplotes species as a case study 94%
- Antimicrobial resistance determinants in silage 94%
Similar papers in this journal
- Global transcriptome analysis of Stenotrophomonas maltophilia in response to growth at human body temperature 97%
- Comparative genomics of Nocardia seriolae reveals recent importation and subsequent widespread dissemination in mariculture farms in South Central Coast, Vietnam 94%
- Evidence of a novel sublineage of Streptococcus agalactiae in elephants from zoo populations in Germany 94%
Similar papers in this journal
- Deep phylo-taxono genomics reveals Xylella as a variant lineage of plant associated Xanthomonas with Stenotrophomonas and Pseudoxanthomonas as misclassified relatives 96%
- Extreme genome selection towards complete antimicrobial resistance in a nosocomial strain of Stenotrophomonas maltophilia complex 93%
- Genomic architecture of three newly isolated unclassified Butyrivibrio species elucidate their potential role in the rumen ecosystem 93%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.