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Re-emergence of Sylvatic Dengue 2 during an outbreak in Southeastern Senegal, Kedougou 2020

Dieng, I.; Diarra, M.; Sadio, B. D.; Gaye, A.; Sow, B.; Ndione, M. H. D.; Diallo, D.; Ndiaye, M.; Diallo, A.; Sankhe, S.; Faye, M.; Diop, B.; Sall, A. A.; Fall, G.; Faye, O.; Loucoubar, C.; Faye, O.; Weaver, S.; Diallo, M.; Barry, M. A.; Diagne, M. M.

2023-11-23 infectious diseases
10.1101/2023.11.22.23298824 medRxiv
Show abstract

Dengue outbreaks in West Africa, linked to urban cycle viruses, pose a significant public health threat. In 2020, a sylvatic Dengue 2 outbreak in Kedougou, southeastern Senegal, resulted in 59 confirmed cases, suggesting these strains may not require additional adaptation but could re-emerge into urban transmission cycles in the region.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
Emerging Infectious Diseases
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Top 0.1%
26.7%
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2
PLOS Neglected Tropical Diseases
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Top 1%
7.9%
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3
PLOS Global Public Health
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Top 3%
6.3%
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4.1%
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5
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Top 2%
3.2%
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6
Open Forum Infectious Diseases
◐ 142 papers in training set
Top 0.9%
3.2%
50% of probability mass above
7
Journal of Medical Virology
○ 140 papers in training set
Top 0.8%
3.1%
8
BMC Infectious Diseases
○ 133 papers in training set
Top 1%
2.8%
9
Journal of Clinical Virology
○ 63 papers in training set
Top 0.3%
2.5%
10
International Journal of Infectious Diseases
○ 129 papers in training set
Top 0.9%
2.5%
11
Parasites & Vectors
○ 60 papers in training set
Top 0.7%
2.1%
12
PLOS ONE
● 5266 papers in training set
Top 47%
1.7%
13
Infection, Genetics and Evolution
○ 42 papers in training set
Top 0.4%
1.7%
14
Heliyon
○ 152 papers in training set
Top 4%
1.5%
15
Travel Medicine and Infectious Disease
○ 14 papers in training set
Top 0.1%
1.4%
16
The Journal of Infectious Diseases
◐ 202 papers in training set
Top 2%
1.4%
17
Scientific Reports
○ 3612 papers in training set
Top 60%
1.3%
18
Acta Tropica
○ 13 papers in training set
Top 0.3%
1.1%
19
Transactions of The Royal Society of Tropical Medicine and Hygiene
◐ 18 papers in training set
Top 0.3%
1.1%
20
Frontiers in Cellular and Infection Microbiology
○ 109 papers in training set
Top 3%
1.0%
21
Vaccines
○ 198 papers in training set
Top 3%
1.0%
22
Journal of Medical Entomology
◐ 18 papers in training set
Top 0.4%
1.0%
23
Eurosurveillance
● 83 papers in training set
Top 0.8%
0.9%
24
Tropical Medicine and Infectious Disease
○ 12 papers in training set
Top 0.4%
0.8%
25
Journal of Virological Methods
○ 37 papers in training set
Top 0.4%
0.8%
26
Transboundary and Emerging Diseases
○ 37 papers in training set
Top 0.5%
0.8%
27
Pathogens
○ 56 papers in training set
Top 1%
0.8%
28
Microbiology Spectrum
● 469 papers in training set
Top 10%
0.8%
29
Microbiology Resource Announcements
● 25 papers in training set
Top 0.5%
0.6%
30
Tropical Medicine & International Health
○ 14 papers in training set
Top 0.8%
0.6%

"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.