A personalized antibody score for predicting individual COVID-19 vaccine-elicited antibody levels from basic demographic and health information
Nakamura, N.; Park, H.; Kim, K. S.; Sato, Y.; Jeong, Y. D.; Iwanami, S.; Fujita, Y.; Zhao, T.; Tani, Y.; Nishikawa, Y.; Yamamoto, C.; Kobashi, Y.; Kawamura, T.; Sugiyama, A.; Nakayama, A.; Kaneko, Y.; Aihara, K.; Iwami, S.; Tsubokura, M.
Show abstract
Antibody titers wane after two-dose COVID-19 vaccinations, but individual variation in vaccine-elicited antibody dynamics remains to be explored. Here, we created a personalized antibody score that enables individuals to infer their antibody status by use of a simple calculation. We recently developed a mathematical model of B cell differentiation to accurately interpolate the longitudinal data from a community-based cohort in Fukushima, Japan, which consists of 2,159 individuals who underwent serum sampling two or three times after a two-dose vaccination with either BNT162b2 or mRNA-1273. Using the individually reconstructed time course of the vaccine-elicited antibody response, we first elucidated individual background factors that contributed to the main features of antibody dynamics, i.e., the peak, the duration, and the area under the curve. We found that increasing age was a negative factor and a longer interval between the two doses was a positive factor for individual antibody level. We also found that the presence of underlying disease and the use of medication affected antibody levels negatively, whereas the presence of adverse reactions upon vaccination affected antibody levels positively. We then applied to these factors a recently proposed computational method to optimally fit clinical scores, which resulted in an integer-based score that can be used to evaluate the antibody status of individuals from their basic demographic and health information. This score can be easily calculated by individuals themselves or by medical practitioners. There is a potential usefulness of this score for identifying vulnerable populations and encouraging them to get booster vaccinations. Significance statementDifferent individuals show different antibody titers even after the same COVID-19 vaccinations, making some individuals more prone to breakthrough infections than others. Such variability remains to be clarified. Here we used mathematical modeling to reconstruct individual post-vaccination antibody dynamics from a cohort of 2,159 individuals in Fukushima, Japan. Machine learning identified several positive and negative factors affecting individual antibody titers. Positive factors included adverse reactions after vaccinations and a longer interval between two vaccinations. Negative factors included age, underlying medical conditions, and medications. We combined these factors and developed an "antibody score" to estimate individual antibody dynamics from basic demographic and health information. This score can help to guide individual decision-making about taking further precautions against COVID-19.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Estimating serum cross-neutralizing responses to SARS-CoV-2 Omicron sub-lineages elicited by pre-Omicron or Omicron breakthrough infection with exposure interval compensation modeling 95%
- T cell epitope mapping reveals immunodominance of evolutionarily conserved regions within SARS-CoV-2 proteome. 94%
- Characterizing adjuvants' effects at the murine immunoglobulin repertoire level 93%
Similar papers in this journal
Similar papers in this journal
Similar papers in this journal
- Optimizing vaccine allocation for COVID-19 vaccines: potential role of single-dose vaccination 94%
- Isolation may select for earlier and higher peak viral load but shorter duration in SARS-CoV-2 evolution 94%
- Maternal pertussis immunization and the blunting of routine vaccine effectiveness: A meta-analysis and modeling study 93%
Similar papers in this journal
- The potential impact of Omicron and future variants of concern on SARS-CoV-2 transmission dynamics and public health burden: a modelling study 93%
- The importance of sustained compliance with physical distancing during COVID-19 vaccination rollout 93%
- COVID-19 in Italy: targeted testing as a proxy of limited health care facilities and a key to reducing hospitalization rate and the death toll 91%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.