Trichoderma asperellum: First report in Bangladesh
Uddin, S. A.; Hossain, I. -; Mahmud, H. -; Monjil, M. S.; Hossain, M. D.
Show abstract
The experiment was conducted at four laboratory, Bangladesh Agricultural University, Mymensingh to identify T. asperellum and its characterization was obtained from the rhizosphere of 49 different crops in 109 different locations of 36 districts in Bangladesh. Fifteen isolates of 88 isolates in T. asperellum were characterized on morphological and physiological features. All of the isolates were produced at 35 {degrees}C, but only TR27 and TR45 were grown and sporulate at 40 {degrees}C. Mycelial growth of all the isolates was reduced with the increasing of pH value. Molecular characterization in four isolates of TR27, TR45, TR70 and TR85 were studied at ITS and TEF region nucleotide sequencing among 15 isolates of T. asperellum and the morphological characterization at ITS and tef1 nucleotide sequencing was assimilated with molecular characterization. The isolates of TR45, TR70 and TR85 were found with 98% homology and TR27 exhibited 88% against their respective closest isolate. The isolates of TR27 and TR85 marked their respective nearest homology at 96%, while TR45 showed 99%, and 93% homology was signified with TR70 in TEF sequences. Three isolates (TR45, TR70 and TR85) were identified as T. asperellum of 100% bootstrap value and TR27 isolate was also recognized with 72% bootstrap value in phylogenetic tree. In phylogenetic analysis, tef1 extended better differentiation among the Trichoderma isolates within and among the groups of closely related species than the rDNA of the ITS region in reflecting wider variability in the isolates while a higher transversion ratio and evolutionary divergence were defined. Moreover the exploring of scientific and useful diversification of Trichoderma isolates on physiological and molecular traits has deemed in research fields. IMPORTANCETrichoderma is an important genus in different aspect of uses as biofertilizer and bioremediation in agriculture. Specific identification in physiological and molecular characterization has also foremost attention with genome sequences as stored in databases. The diversity and genetic distances were ascertained among the isolates in phylogenetic analysis with the sequence data of the ITS region and tef1 of known Trichoderma strains was found in GenBank. Consequently, the databases of Trichoderma asperellum in molecular characterization can be frequently studied in the beneficial scope of agriculture. Trichoderma isolates of Rhizosphere soil in 4 locations with crops of (TR27) Sadar, Moulvibazar (Rice), (TR45) Sadar, Mymensingh (Sweet gourd), (TR70) Chapra, Chapai Nawabganj (Sesame) and (TR85) Nayanpur, Lalmonirhat (Maize) were found to be substantiated as Trichoderma asperellum strain in Bangladesh that were confirmed on physiological and molecular characters, and utilization of this strain can run faster in invasive technologies to control crop diseases.
Matching journals
The top 1 journal accounts for 50% of the predicted probability mass.
Similar papers in this journal
- Molecular Identification and Antimicrobial Potential of Endophytic Fungi Against Some Grapevine Pathogens 98%
- Natural field diagnosis and molecular confirmation of fungal and bacterial watermelon pathogens in Bangladesh: A case study from Natore and Sylhet district 98%
- Characterization of Metarhizium majus (Hypocreales: Clavicipitaceae) isolated from the Western Cape province, South Africa 97%
Similar papers in this journal
- Climate influences scrub typhus occurrence in Vellore, Tamil Nadu, India: Analysis of a 15 year dataset 95%
- Development and Validation of LAMP Primer Sets for Rapid and Correct Identification of Aspergillus fumigatus Carrying the cyp51A TR46 Azole Resistance Gene 94%
- Predictive signs and symptoms of Bacterial Meningitis isolates in Northern Ghana 94%
Similar papers in this journal
- Genomic sequencing of the aquatic Fusarium spp. QHM and BWC1 and their potential application in environmental protection 96%
- Diversity of culturable actinobacteria producing protease inhibitors from the intertidal zones of Maharashtra, India 96%
- Nutrient availability shifts the biosynthetic potential of soil-derived microbial communities 93%
Similar papers in this journal
- Peptaibol Production and Characterization from Trichoderma asperellum and their Action as Biofungicide. 97%
- Degenerated virulence and irregular development of Fusarium oxysporum f. sp. niveum induced by successive subculture 96%
- Pathogenic and genetic diversity of Sclerotium rolfsii, the causal agent of Southern blight of common bean in Uganda 95%
Similar papers in this journal
- Exploring the phytobeneficial and biocontrol capacities of endophytic bacteria isolated from hybrid vanilla pods 96%
- Effects of cellular stress on pigment production in Rhodotorula mucilaginosa/alborubescens AJB01 strain from the Caribbean region of Colombia 96%
- Potential PGPR properties of cellulolytic, nitrogen-fixing, and phosphate-solubilizing bacteria of a rehabilitated tropical forest soil 95%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.