Back

Characterizing cellular and molecular variabilities of peripheral immune cells in healthy inactivated SARS-CoV-2 vaccine recipients by single-cell RNA sequencing

Tong, R.; Zhong, J.; Li, R.; Chen, Y.; Hu, L.; Li, Z.; Shi, J.; Lin, G.; Lyu, Y.; Hu, L.; Guo, X.; Liu, Q.; Shuang, T.; Zhang, C.; Yuan, A.; Zhang, M.; Lin, W.; Pu, J.

2021-05-10 infectious diseases
10.1101/2021.05.06.21256781 medRxiv
Show abstract

We systematically investigated the transcriptomes of the peripheral immune cells from 6 inactivated vaccine, BBIBP-CorV recipients at 4 pivotal time points using single-cell RNA-seq technique. First, the significant variation of the canonical immune-responsive signals of both humoral and cellular immunity, as well as other possible symptom-driver signals were evaluated in the specific cell types. Second, we described and compared the common and distinct variation trends across COVID-19 vaccination, disease progression, and flu vaccination to achieve in-depth understandings of the manifestation of immune response in peripheral blood under different stimuli. Third, the expanded T cell and B cell clones were correlated to the specific phenotypes which allowed us to characterize the antigen-specific ones much easier in the future. At last, other than the coagulopathy, the immunogenicity of megakaryocytes in vaccination were highlighted in this study. In brief, our study provided a rich data resource and the related methodology to explore the details of the classical immunity scenarios.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
Cell Discovery
57 papers in training set
Top 0.1%
22.4%
2
Clinical and Translational Medicine
31 papers in training set
Top 0.1%
8.9%
3
Signal Transduction and Targeted Therapy
30 papers in training set
Top 0.1%
7.9%
4
Frontiers in Immunology
638 papers in training set
Top 2%
6.7%
5
iScience
1154 papers in training set
Top 1%
6.3%
50% of probability mass above
6
Vaccines
198 papers in training set
Top 0.7%
4.3%
7
Journal of Medical Virology
140 papers in training set
Top 0.8%
3.2%
8
Protein & Cell
25 papers in training set
Top 0.1%
3.2%
9
Scientific Reports
3612 papers in training set
Top 38%
2.8%
10
Nature Communications
5641 papers in training set
Top 37%
2.8%
11
eLife
5828 papers in training set
Top 38%
2.8%
12
Genomics, Proteomics & Bioinformatics
172 papers in training set
Top 0.7%
2.6%
13
eBioMedicine
183 papers in training set
Top 2%
2.1%
14
Journal of Molecular Cell Biology
22 papers in training set
Top 0.1%
2.1%
15
Cell Reports
1498 papers in training set
Top 18%
1.9%
16
Theranostics
37 papers in training set
Top 0.7%
1.1%
17
Science China Life Sciences
29 papers in training set
Top 0.4%
1.1%
18
International Immunopharmacology
15 papers in training set
Top 0.2%
1.1%
19
Med
39 papers in training set
Top 0.5%
1.0%
20
Cell Reports Medicine
153 papers in training set
Top 5%
0.8%
21
Proceedings of the National Academy of Sciences
2444 papers in training set
Top 44%
0.6%
22
Science Advances
1243 papers in training set
Top 33%
0.6%
23
Cellular & Molecular Immunology
14 papers in training set
Top 0.1%
0.6%