Back

Multi-tissue Multi-omics Nutrigenomics Indicates Context-specific Effects of DHA on Rat Brain

Zhang, G.; Meng, Q.; Blencowe, M.; Rahul, A.; Gomez-Pinilla, F.; Yang, X.

2020-09-03 systems biology
10.1101/2020.09.02.280289 bioRxiv
Show abstract

ScopeWe explored the influence of DHA on cardiometabolic and cognitive phenotypes, and multiomic alterations in the brain under two metabolic conditions to understand context-specific nutritional effects. Methods and ResultsRats were randomly assigned to a DHA-rich or a control chow diet while drinking water or high fructose solution, followed by profiling of metabolic and cognitive phenotypes and the transcriptome and DNA methylome of the hypothalamus and hippocampus. DHA reduced serum triglyceride and improved insulin resistance and memory exclusively in the fructose-consuming rats. In hippocampus, DHA affected genes related to synapse functions in the chow group but immune functions in the fructose group; in hypothalamus, DHA altered immune pathways in the chow group but metabolic pathways in the fructose group. Network modeling revealed context-specific regulators of DHA effects, including Klf4 and Dusp1 for chow condition and Lum, Fn1, and Col1a1 for fructose condition in hippocampus, as well as Cyr61, JunB, Ier2, and Pitx2 under chow condition and Hcar1, Cdh1, and Osr1 under fructose condition in hypothalamus. ConclusionDHA exhibits differential influence on epigenetic loci, genes, pathways, and metabolic and cognitive phenotypes under different dietary contexts, supporting population stratification in DHA studies to achieve precision nutrition.

Matching journals

The top 3 journals account for 50% of the predicted probability mass.

1
Frontiers in Nutrition
23 papers in training set
Top 0.1%
37.3%
2
PLOS ONE
4510 papers in training set
Top 21%
8.6%
3
The Journal of Nutrition
21 papers in training set
Top 0.1%
7.0%
50% of probability mass above
4
Scientific Reports
3102 papers in training set
Top 30%
4.1%
5
Nutrients
64 papers in training set
Top 0.5%
3.7%
6
Current Developments in Nutrition
15 papers in training set
Top 0.3%
3.0%
7
Epigenetics
43 papers in training set
Top 0.2%
3.0%
8
The Journal of Nutritional Biochemistry
13 papers in training set
Top 0.1%
2.1%
9
Frontiers in Endocrinology
53 papers in training set
Top 0.9%
1.9%
10
Brain Research
35 papers in training set
Top 0.5%
1.9%
11
eLife
5422 papers in training set
Top 48%
1.3%
12
BMC Medicine
163 papers in training set
Top 5%
1.3%
13
Journal of Clinical Medicine
91 papers in training set
Top 4%
1.3%
14
Frontiers in Aging Neuroscience
67 papers in training set
Top 3%
0.9%
15
iScience
1063 papers in training set
Top 28%
0.8%
16
FASEB BioAdvances
15 papers in training set
Top 0.2%
0.8%
17
Metabolomics
11 papers in training set
Top 0.4%
0.8%
18
Aging Cell
144 papers in training set
Top 3%
0.8%
19
Frontiers in Genetics
197 papers in training set
Top 9%
0.8%
20
The Journal of Steroid Biochemistry and Molecular Biology
10 papers in training set
Top 0.3%
0.8%
21
Journal of Biomedical Informatics
45 papers in training set
Top 1%
0.8%
22
BMC Public Health
147 papers in training set
Top 6%
0.8%
23
BMJ Open
554 papers in training set
Top 13%
0.7%
24
Frontiers in Microbiology
375 papers in training set
Top 9%
0.7%
25
Gene
41 papers in training set
Top 3%
0.5%
26
Genomics, Proteomics & Bioinformatics
171 papers in training set
Top 7%
0.5%