Mortality Baselines and Excess Mortality Events in Belgian and Greek Cities Using Singular Spectrum Analysis
Delforge, D.; Charalampous, P.; Bustos Sierra, N.; De Clercq, E.; Katragkou, E.; Konstantinoudis, G.; Kostoulas, P.; Lambrou, A.; Masquelier, B.; Paraskevis, D.; Thiery, W.; Tonnelier, M.; Speybroeck, N.
Show abstract
Background: Excess mortality estimates depend on an expected baseline, an unobservable quantity typically derived from models with prescribed functional forms and short reference periods that exclude exceptional events. Singular Spectrum Analysis (SSA) offers a nonparametric alternative but requires subjective component selection and is sensitive to outliers. We combined SSA with automated component selection and outlier interpolation to estimate long-term baselines and compile a catalog of excess mortality events (EMEs). Methods: We analyzed weekly all-cause mortality (2015-2024) for six metropolitan areas with contrasting climatic, demographic, and epidemiological contexts: Brussels, Antwerp, and Liege (Belgium), and Athens, Thessaloniki, and Larisa (Greece). SSA was applied to standardized log-mortality rates; components were selected using Monte Carlo SSA, and COVID-19 periods were interpolated iteratively. EMEs were defined as weeks exceeding a quasi-Poisson two-z-score threshold, then screened for coincidence with heat waves, cold waves, COVID-19 periods, and influenza epidemics. Results: Baselines were consistent within countries: annual cycles in Belgium, with an additional significant semiannual cycle in Greece reflecting summer mortality. We cataloged 170 EMEs spanning 456 weeks and 14,210 excess deaths. Pandemic weeks accounted for 77% of excess mortality, and 96 weeks coincided with temperature extremes; 56 EMEs, representing 3.7% of excess mortality, remained unmatched. Conclusions: SSA yields reproducible, low-assumption baselines that capture country-specific seasonality. Because flexible baselines can absorb recurrent seasonal mortality, component selection is a substantive choice that should be reported explicitly, together with its sensitivity.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Potential biases arising from epidemic dynamics in observational seroprotection studies 89%
- How Timing of Stay-at-home Orders and Mobility Reductions Impacted First-Wave COVID-19 Deaths in US Counties 89%
- Detecting changes in population trends in infection surveillance using community SARS-CoV-2 prevalence as an exemplar 89%
Similar papers in this journal
- Comparing methods to predict baseline mortality for excess mortality calculations 93%
- Evaluation of statistical methods used in the analysis of interrupted time series studies: a simulation study 90%
- Towards reduction in bias in epidemic curves due to outcome misclassification through Bayesian analysis of time-series of laboratory test results: Case study of COVID-19 in Alberta, Canada and Philadelphia, USA 90%
Similar papers in this journal
- Excess mortality during the COVID-19 outbreak in Italy: a two-stage interrupted time series analysis 91%
- Predicting and forecasting the impact of local outbreaks of COVID-19: Use of SEIR-D quantitative epidemiological modelling for healthcare demand and capacity 89%
- Reweighting the UK Biobank to reflect its underlying sampling population substantially reduces pervasive selection bias due to volunteering 89%
Similar papers in this journal
- Foundation time series models for forecasting and policy evaluation in infectious disease epidemics 91%
- Assessing the effects of non-pharmaceutical interventions on SARS-CoV-2 transmission in Belgium by means of an extended SEIQRD model and public mobility data 91%
- Evaluating Age-Dependent Transmission and Vaccination Policy in Singapore's SARS-CoV-2 Epidemic: A Computational Modelling Approach 90%
Similar papers in this journal
- Estimating weekly excess mortality at sub-national level in Italy during the COVID-19 pandemic 92%
- Tracking the Dynamics and Allocating Tests for COVID-19 in Real-Time: an Acceleration Index with an Application to French Age Groups and Départements * 90%
- Is large-scale rapid CoV-2 testing a substitute for lockdowns? The case of Tübingen 90%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.