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Effective tumor kinetics inferred from single routine H&E biopsies enable counterfactual virtual radiotherapy trials

Schlicke, P.; Ercan, C.; Ranjbar, S.; Seldomridge, A. N.; Aggarwal, S.; Mehta, A.; Sainz, T. P.; Zahid, M. U.; Fang, P.; Hofmann, V. A.; Pasetto, S.; Cisneros Napravnik, T.; Puebla-Osorio, N.; Kuttler, C.; Klopp, A.; Colbert, L.; Holder, A. M.; Weiser, R.; Lin, S. H.; Torres-Cabala, C. A.; Vega, F.; Yuan, Y.; Enderling, H.

2026-09-12 oncology
10.64898/2026.09.10.26362768 medRxiv
Show abstract

Routine H&E-histopathology captures spatial snapshots of tumor ecosystems, yet computational pathology largely treats them as textures without explicit links to underlying kinetics. We show that patient-specific parameters of a mechanistic reaction-diffusion model can be inferred from a single biopsy. Cell-nucleus point patterns are fitted jointly to the analytical two-point correlation function and power spectral density, recovering patient-specific mechanistic proliferation and diffusion rates across eleven multicenter cohorts. Derived dispersion length and front velocity define mechanistic phenotypes stratifying progression-free and overall survival and adding information independent of routine covariates. We illustrate counterfactual radiotherapy simulations in glioblastoma and show that a virtual clinical trial deescalating histology-calibrated faster-growing tumors to hypofractionation while dose-intensifying slower-growing tumors adds 96.7 days of restricted mean progression-free in silico survival over standard of care (permutation p<0.001 against random allocation to the same arms). This provides a low-barrier transition from routine histopathology to mechanistically interpretable model-based forward simulations.

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