Stress induces DCP2 translation via a stalling-dependent mechanism
Roiuk, M.; Neff, M.; Vatovec, T.; Papazian, A.; Helms, V.; Teleman, A. A.
Show abstract
The integrated stress response (ISR) globally suppresses protein synthesis while selectively permitting translation of a small subset of stress-responsive mRNAs, many of which contain upstream or overlapping open reading frames (uORFs/oORFs). Although translational induction of transcripts such as ATF4 has classically been attributed to delayed re-initiation caused by reduced ternary complex availability, the mechanisms by which uORFs and oORFs allow ISR-selective translation remain incompletely understood. Here, using ribosome profiling during early ISR activation combined with reporter assays, we identify DCP2, encoding a major mRNA decapping enzyme, as a previously unrecognized ISR-induced transcript. We show that translational induction of DCP2 depends on an overlapping ORF whose conserved 3' region, corresponding to a ribosome pausing site, acts as a potent inhibitory element. Both the DCP2 oORF and main ORF increase in translation during stress, indicating that stress relieves repression by this inhibitory element. This reveals a mode of ISR-dependent gene regulation in which inhibition by a nascent peptide or stalling element embedded either in a uORF or an oORF is relieved upon stress to induce translation.
Matching journals
The top 4 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Selective 40S footprinting reveals that scanning ribosomes remain cap-tethered in human cells 94%
- eIF3 associates with 80S ribosomes to promote translation elongation, mitochondrial homeostasis, and muscle health 94%
- Timing of transcription controls the selective translation of newly synthesized mRNAs during acute environmental stress 93%
Similar papers in this journal
Similar papers in this journal
Similar papers in this journal
- Dedicated chaperones coordinate co-translational regulation of ribosomal protein production with ribosome assembly to preserve proteostasis 94%
- Mapping of in vivo cleavage sites uncovers a major role for yeast RNase III in regulating protein-coding genes 94%
- Decapping factor Dcp2 controls mRNA abundance and translation to adjust metabolism and filamentation to nutrient availability 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.