A traveling network model predicts emergent dynamics and search behavior from local remodeling in Physarum polycephalum
Chen, A.; Tan, S.; Mundewadi, Y. V.; Riedel-Kruse, I. H.; Cira, N. J.
Show abstract
A variety of connected systems, ranging from the cytoskeleton to human organizations, dynamically rearrange themselves in order to move through physical or abstract space. However, our understanding of how systems-level behaviors arise from local restructuring actions remains limited, necessitating comparison of real-world data to models that predict network structure and dynamics. To understand these systems, we study an accessible example, the branching slime mold Physarum polycephalum, by imaging the organism as it travels and extracting key fundamental quantities from its continuously remodeling tubular network. By using these quantities as input parameters to a traveling network model, we find that with no further fitting, the model quantitatively matches key emergent properties from P. polycephalum dynamics including path length, relocation time, and search efficiency at different spatial resolutions. These findings demonstrate how a traveling network model can capture P. polycephalum behaviors, highlighting the potential to use traveling networks more broadly for understanding and predicting connected dynamic systems by linking local measurements to emergent, system-wide behaviors.
Matching journals
The top 5 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Attractors are less stable than their basins: Canalization creates a coherence gap in gene regulatory networks 95%
- Theory of multiscale epithelial mechanics under stretch: from active gels to vertex models 95%
- Mitochondrial network branching enables rapid protein spread with slower mitochondrial dynamics 94%
Similar papers in this journal
- Exponential trajectories, cell size fluctuations and the adder property in bacteria follow from simple chemical dynamics and division control 95%
- A Waddingtonian description of the dynamics of Turing patterns 95%
- Modularity-dependent storage of dynamic spiking patterns: bridging micro- and mesoscopic representations 95%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.