First detected incursions of avian influenza H5N1 clade 2.3.4.4b into mainland Australia from the Southern Ocean
Neave, M. J.; Hair, S.; Mileto, P.; Mahar, J. E.; Stevens, V.; Davies, K.; O'Dea, M.; Iqbal, S.; Ong, J. W. L.; Hughes, A.; Wang, J.; Fox, N.; Crowder, J. C.; Gillies, D.; Butler, J.; Grimsey, J.; McMahon, A.; Gagliardi, M.; Grech, E.; Ford, M.; Soul, C.; Poon, M.; Reid, T.; Colling, A.; McInnes, J. C.; Burgess, T. L.; Hodgson, J. C.; Boulinier, T.; Williams, D. T.; Luczo, J. M.; Bhardwaj, V.; O'Brien, D.; Eagles, D.; Baele, G.; Wong, F. Y. K.
Show abstract
High pathogenicity avian influenza H5N1 clade 2.3.4.4b has caused a panzootic of devastating impact to poultry and wildlife globally. The Australian continent and broader Oceania until recently remained the last major region without confirmed detections. Here we report the first H5N1 clade 2.3.4.4b detections from two live seabirds - a brown skua and a southern giant petrel - found on the south coast of Western Australia in June 2026. Virus genome sequencing showed that both viruses were most closely related to H5N1 viruses detected recently on sub-Antarctic islands in the Southern Indian Ocean. In time-calibrated phylogeographic analyses, both viruses sampled in Western Australia clustered with viruses from Heard Island, a sub-Antarctic external territory of Australia. Ancestral location reconstruction also identified Heard Island as the most probable source location, although unsampled intermediate locations cannot be excluded. The two Western Australian detections were estimated to be independent incursions from Heard Island, rather than local transmission on mainland Australia. There was no evidence of reassortment with endemic avian influenza viruses in Australia, and both virus sequences retained key avian-like genetic markers and lacked known substitutions for reduced antiviral susceptibility. These detections revealed a Southern Ocean pathway of recurrent H5N1 incursions into Australia, highlighting the risk of potential establishment on the mainland and the need for heightened surveillance and rapid, nationally-coordinated, virus genomic characterisation.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Massive outbreak of Influenza A H5N1 in elephant seals at Peninsula Valdes, Argentina: increased evidence for mammal-to-mammal transmission 94%
- Individual bat viromes reveal the co-infection, spillover and emergence risk of potential zoonotic viruses 94%
- Highly pathogenic avian influenza A (H5N1) in marine mammals and seabirds in Peru 94%
Similar papers in this journal
- Viral diversity, ecological interconnectedness, and the identification of mammalian chuviruses in Australian microbats 95%
- Evolution and rapid spread of a reassortant A(H3N2) virus that predominated the 2017-2018 influenza season 93%
- Detection of H3N8 influenza A virus with multiple mammalian-adaptive mutations in a rescued Grey seal (Halichoerus grypus) pup 93%
Similar papers in this journal
- Investigating Factors Driving Shifts in Subtype Dominance within H5Nx Clade 2.3.4.4b High-Pathogenicity Avian Influenza viruses 93%
- Genetic diversity, recombination and cross-species transmission of a waterbird gammacoronavirus in the wild 92%
- Clade 2.3.4.4b H5N1 high pathogenicity avian influenza virus (HPAIV) from the 2021/22 epizootic is highly duck adapted and poorly adapted to chickens 92%
Similar papers in this journal
- Genomic characterization of novel bat kobuviruses in Madagascar: implications for viral evolution and zoonotic risk 91%
- Passage of human-origin influenza A virus in swine tracheal epithelial cells selects for adaptive mutations in the hemagglutinin gene 91%
- Decreased incidence, virus transmission capacity, and severity of COVID-19 at altitude on the American continent 91%
Similar papers in this journal
- Investigating high pathogenicity avian influenza virus incursions to remote islands: Detection of H5N1 on Gough Island in the South Atlantic Ocean 93%
- Pigs are highly susceptible to but do not transmit mink-derived highly pathogenic avian influenza virus H5N1 clade 2.3.4.4b 92%
- Rapid Surge of Reassortant A(H1N1) Influenza Viruses in Danish Swine and their Zoonotic Potential 92%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.