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Post-infection immune response in adults with COVID-19 with and without nirmatrelvir-ritonavir treatment and virologic rebound

Ghimire, D.; Hasund, C. M.; Colangeli, J. B.; Liew, M. Y.; Abar, E.; Barry, M.; Alexandrescu, A.; Kotzen, B. L.; Reynolds, Z.; Passell, E.; Mandell, C.; Smith-Sparks, Z.; Su, K.; Boucau, J.; Glover, O. T.; Leeman, B.; Edelstein, G. E.; Choudhary, M. C.; Li, Y.; Patel, N.; Sparks, J. A.; Barczak, A. K.; Li, J. Z.; Siedner, M. J.; Lemieux, J. E.

2026-06-23 immunology
10.64898/2026.06.22.733737 bioRxiv
Show abstract

BackgroundNirmatrelvir-ritonavir (N-R) reduces morbidity and mortality from COVID-19 in high-risk individuals; however, N-R use has been associated with risk of SARS-CoV-2 virologic rebound. The mechanisms contributing to virologic rebound after N-R treatment are currently unknown. One plausible mechanism is that antiviral treatment may alter the development of immune responses to SARS-CoV-2 infection, thereby contributing to rebound after cessation of therapy. MethodsWe profiled immune responses in a case-ascertained, longitudinal, prospective cohort of ambulatory individuals with COVID-19. Participants were grouped according to whether virological rebound occurred and whether they had received N-R treatment. We assessed antibody, T-cell, and innate responses. ResultsWe observed no differences in the binding or neutralizing antibody, T-cell, and innate immune responses between participants with virologic rebound compared to participants without virologic rebound. N-R use was associated with slightly weaker antibody responses overall, even after adjustment for immunosuppression. ConclusionVirologic rebound after N-R treatment is likely driven by non-immune mechanisms. FundingThe project was supported by the National Institutes of Health (R01 AI 138801) and the Massachusetts Consortium on Pathogen Readiness. Its contents are solely the responsibility of the authors and do not necessarily represent the official views of the NIH.

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