Back

Automated Parameter Estimation for Camera Trap Density Models Using Computer Vision-Enhanced Distance Sampling

McMurry, S.; Alyetama, M.; Goldstein, B.; Kays, R.

2026-06-16 ecology
10.64898/2026.06.14.732225 bioRxiv
Show abstract

Models for estimating animal density from camera traps require four parameters informing detection: movement speed, daily activity level, staying time (duration animals remain within the detection zone), and effective detection distance. These parameters traditionally come from labor-intensive manual measurements and auxiliary telemetry. Recent advances in computer vision can provide the positions of animals in camera trap images, which have been used for distance sampling. We extend this approach to extract all four parameters from imagery, providing the first AI-derived estimates of movement speed and staying time from automated coordinate tracking. We also introduce a new joint multi-species hierarchical distance function that estimates deployment-specific effective detection distances while borrowing strength across species through partial pooling. Our pipeline integrates MegaDetector for animal detection, the Segment Anything Model for segmentation, and Dense Prediction Transformers for monocular depth estimation. From frame-level coordinates, we reconstruct movement trajectories across burst sequences to estimate speed with size-biased distribution corrections, calculate staying time through bounding box interpolation, and estimate activity levels from detection timestamps. The joint hierarchical distance function decomposes the detection scale parameter into a shared deployment-level effect and species-specific offsets, so species effects represent deviations from the multi-species average, allowing data-rich species to inform detection conditions where rare species have few observations. AI-derived scene depth enters the model as a covariate on detection range, providing a vegetation openness metric from the same pipeline. To address position errors from depth estimation, we apply data quality filters. We processed 122,574 frames from 181 deployments across montane forests in Washington and Montana, generating parameter estimates for 12 species without manual annotation. Automated speed estimates produced day ranges 2.7 to 4.3 times GPS telemetry-derived daily distances, reflecting differences between encounter velocity within detection zones and landscape-scale displacement. Deployment-level variation in detectability exceeded species-level differences 3:1, with scene depth strongly predicting detection range; mean effective detection distances ranged from 4.1 to 7.6 m. Applied to a Random Encounter Model, these parameters yielded a white-tailed deer density estimate of 21.4 animals/km{superscript 2} and the Random Encounter Staying Time model yielded 11.6animals/km{superscript 2} in Montana. This pipeline enables scalable density estimation across large camera trap networks.

Matching journals

The top 3 journals account for 50% of the predicted probability mass.

1
Methods in Ecology and Evolution
176 papers in training set
Top 0.1%
30.6%
2
Remote Sensing in Ecology and Conservation
14 papers in training set
Top 0.1%
11.7%
3
Movement Ecology
20 papers in training set
Top 0.1%
7.8%
50% of probability mass above
4
Ecological Applications
34 papers in training set
Top 0.1%
5.4%
5
Nature Communications
5641 papers in training set
Top 30%
4.8%
6
PLOS Computational Biology
1863 papers in training set
Top 10%
3.2%
7
Nature Methods
385 papers in training set
Top 3%
3.2%
8
PLOS ONE
5266 papers in training set
Top 38%
3.2%
9
Ecology and Evolution
267 papers in training set
Top 3%
2.7%
10
Journal of The Royal Society Interface
235 papers in training set
Top 2%
2.1%
11
Ecology Letters
135 papers in training set
Top 1%
1.9%
12
Journal of Applied Ecology
39 papers in training set
Top 0.7%
1.7%
13
Journal of Animal Ecology
75 papers in training set
Top 0.9%
1.7%
14
Scientific Reports
3612 papers in training set
Top 55%
1.7%
15
Ecology
85 papers in training set
Top 1%
1.5%
16
Science Advances
1243 papers in training set
Top 26%
1.1%
17
eLife
5828 papers in training set
Top 58%
1.1%
18
Communications Biology
993 papers in training set
Top 23%
1.1%
19
Proceedings of the National Academy of Sciences
2444 papers in training set
Top 37%
1.0%
20
PLOS Biology
486 papers in training set
Top 10%
1.0%
21
Remote Sensing
10 papers in training set
Top 0.2%
0.8%
22
Ecosphere
57 papers in training set
Top 1%
0.8%
23
Molecular Ecology Resources
171 papers in training set
Top 2%
0.8%