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Integrative Transfer Network: Deep Transfer Learning Across Populations and Prediction Targets

Gao, Y.; Cui, Y.

2026-06-16 bioinformatics
10.64898/2026.06.12.731936 bioRxiv
Show abstract

Large-scale clinical and biomedical datasets increasingly contain both diverse subgroup attributes (e.g., demographic or clinical subgroups) and multiple prediction targets. Although various machine learning approaches can address subgroup differences or multi-target prediction, they often consider these aspects independently rather than jointly. To more effectively capture the shared and subgroup-specific information in such complex datasets, we propose the Integrative Transfer Network (ITN), a deep neural network designed to leverage data across subgroups and multiple related outcomes simultaneously. In extensive experiments, including time-to-event and classification tasks where demographic subgroups and multiple disease end-points are prevalent, ITN demonstrates consistent improvements in subgroup-specific prediction by borrowing strength from other subgroups and outcomes. We envision ITN as a unified frame-work for learning from heterogeneous datasets where subgroup-specific insights are critical.

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