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Multivariate determinants of wearable-measured sleep quality across a large observational cohort: roles of physical activity, gut microbiome, blood analytes, and lifestyle factors.

Cavon, J.; Perez, C.; Quinn-Bohmann, N.; Magis, A. T.; Gibbons, S. M.

2026-05-29 health informatics
10.64898/2026.05.27.26354250 medRxiv
Show abstract

Emerging evidence links the gut microbiome to sleep quality, yet measuring sleep at scale remains challenging. Commercial wearables, such as Fitbit, capture objective sleep and activity data in naturalistic settings. We integrated Fitbit data from a large, deeply-phenotyped cohort with paired lifestyle and health questionnaires. Wearable-derived measures aligned well with self-reported sleep, activity, and happiness. We identified dozens of covariate-adjusted associations between Fitbit-derived sleep features, lifestyle factors, and multi-omic data. Among molecular feature sets, the gut microbiome showed the greatest number of associations with sleep quality: butyrate-producing genera were positively associated with sleep and amplified the benefits of physical activity. Oscillospira, in particular, was consistently associated with better sleep. In blood, insulin, omega-3, and cortisol correlated with poorer sleep, whereas lower alcohol intake and mineral supplements correlated with better sleep. These robust, covariate-adjusted findings advance mechanistic understanding of the gut-sleep axis and broader molecular and lifestyle determinants of sleep quality.

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