Back

Mind the gap: quantifying population-individual gap in depressive symptom dynamics through energy landscapes

Tsutsumi, M.; Kubo, T.; Kato, T. A.; Naoki, H.

2026-05-24 bioinformatics
10.64898/2026.05.20.726729 bioRxiv
Show abstract

People do not always feel as they appear. Someone who seems stable may struggle internally, whereas someone who appears distressed may experience it differently. This gap matters in psychiatry, where assessment relies on symptom scales and external evaluation. Here we developed mindGAP (Measuring INDividual-population GAPs in psychiatric energy landscapes), a hierarchical variational Bayesian framework that uses longitudinal questionnaire data to estimate both population-level symptom dynamics and each participants individual symptom dynamics. We applied mindGAP to time-series PHQ-9 data from 248 participants during the COVID-19 pandemic. The population landscape contained three major states, whereas individualized landscapes often diverged from this shared structure. We quantified this gap as individual-population landscape divergence, which was associated not only with depressive severity but also with modern-type depression-related traits (TACS-22) and interpersonal sensitivity-self traits (IPS-22). Thus, mindGAP opens a route to quantifying a previously unquantified gap between population-level and individual-level symptom organization.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
Nature Communications
4913 papers in training set
Top 2%
23.0%
2
Science Advances
1098 papers in training set
Top 0.1%
10.3%
3
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 7%
8.6%
4
eLife
5422 papers in training set
Top 12%
6.5%
5
PLOS Computational Biology
1633 papers in training set
Top 8%
4.4%
50% of probability mass above
6
Cell Systems
167 papers in training set
Top 3%
4.0%
7
Scientific Reports
3102 papers in training set
Top 34%
3.7%
8
Biological Psychiatry
119 papers in training set
Top 1%
2.1%
9
PLOS ONE
4510 papers in training set
Top 49%
1.9%
10
Nature Genetics
240 papers in training set
Top 4%
1.7%
11
Advanced Science
249 papers in training set
Top 11%
1.7%
12
Communications Biology
886 papers in training set
Top 10%
1.5%
13
Molecular Systems Biology
142 papers in training set
Top 0.8%
1.4%
14
npj Digital Medicine
97 papers in training set
Top 2%
1.4%
15
Nature Medicine
117 papers in training set
Top 3%
1.2%
16
Nature Human Behaviour
85 papers in training set
Top 3%
1.2%
17
The American Journal of Human Genetics
206 papers in training set
Top 3%
1.2%
18
Cell Reports Medicine
140 papers in training set
Top 5%
1.2%
19
Cell Genomics
162 papers in training set
Top 5%
0.9%
20
Cell Reports
1338 papers in training set
Top 30%
0.9%
21
Nature
575 papers in training set
Top 15%
0.8%
22
Nano Letters
63 papers in training set
Top 2%
0.8%
23
Computational and Structural Biotechnology Journal
216 papers in training set
Top 8%
0.8%
24
Science
429 papers in training set
Top 20%
0.8%
25
Bioinformatics
1061 papers in training set
Top 9%
0.8%
26
npj Systems Biology and Applications
99 papers in training set
Top 3%
0.7%
27
Genome Medicine
154 papers in training set
Top 9%
0.7%
28
Nature Machine Intelligence
61 papers in training set
Top 4%
0.7%
29
Nature Methods
336 papers in training set
Top 7%
0.5%
30
Patterns
70 papers in training set
Top 3%
0.5%