Back

SdiA as a Repressor of Phagocytosis and Intracellular Survival in Klebsiella pneumoniae: Insights from Macrophage and Amoeba Models

Silva-Bea, S.; Calderon-Gonzalez, R.; Sa-Pessoa, J.; Otero, A.; Romero, M.; Bengoechea, J. A.

2026-05-21 microbiology
10.64898/2026.05.18.725935 bioRxiv
Show abstract

1.In 2024, the World Health Organisation (WHO) classified Klebsiella pneumoniae as a maximum priority pathogen for the development of new alternatives to antibiotics. In this context, understanding the regulation of key virulence mechanisms is essential. Here, we investigated the role of the orphan quorum-sensing receptor SdiA in modulating virulence-associated processes during macrophage infection. Deletion of sdiA ({Delta}sdiA) significantly increased susceptibility to phagocytosis, as demonstrated using an amoeba predation model in which mutant strains formed larger clearance zones compared to wild-type bacteria. This phenotype was also observed in murine macrophages, where {Delta}sdiA strains exhibited increased adhesion (1.5 to 2.5-fold) and phagocytic uptake. Reduced uronic acid levels were also quantified in mutant strains, indirectly indicating a diminished capsule production, likely contributing to this enhanced phagocytosis. Despite enhanced uptake, {Delta}sdiA strains showed increased intracellular survival and replication rates within macrophages, leading to reduced host cell viability. This effect occurred despite loss of interbacterial killing capacity against E. coli, suggesting that enhanced intracellular fitness is not driven by classical antibacterial offensive mechanisms. Notably, mutant-infected macrophages displayed increased generation of reactive oxygen species (ROS), NF-{kappa}B expression, and pro-inflammatory cytokines (mCXCL10 and mTNF) production, indicating that macrophage defence mechanisms are not impaired during mutant infection. Overall, bacterial survival of {Delta}sdiA could result from overwhelming, rather than actively suppressing, host defences. Together, these findings identify SdiA as a negative regulator of phagocytosis and intracellular survival in K. pneumoniae and highlight a context-dependent role in virulence. This work provides new insights into the regulatory networks governing host-pathogen interactions and bacterial adaptation to the intracellular environment. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=150 SRC="FIGDIR/small/725935v1_ufig1.gif" ALT="Figure 1"> View larger version (50K): org.highwire.dtl.DTLVardef@1d45bfdorg.highwire.dtl.DTLVardef@e3547forg.highwire.dtl.DTLVardef@c078f9org.highwire.dtl.DTLVardef@46408a_HPS_FORMAT_FIGEXP M_FIG O_FLOATNOGraphical AbstractC_FLOATNO Loss of sdiA strongly affects phagocytosis, as mutant strains showed increasing adhesion (1.5 to 2.5-fold) and phagocytic uptake. Diminished capsule production could be contributing to this enhanced phagocytosis, as reduced uronic acid levels were also quantified in mutant strains. Despite being internalized at higher rates, mutants exhibited enhanced intracellular survival and replication, reducing macrophage viability. This fitness advantage occurred independently of classical offensive mechanisms, as evidenced by a lost ability to kill E. coli. Notably, mutant-infected macrophages mounted a stronger immune response, marked by elevated ROS, NF-{kappa}B expression, and pro-inflammatory cytokines production (mCXCL10 and mTNF). Together, these findings suggest that strains survive by overwhelming, rather than suppressing, host immune defences. Created with Biorender (https://www.biorender.com/). C_FIG HighlightsO_LISdiA deletion in K. pneumoniae increases susceptibility to phagocytosis. C_LIO_LIThe mutant strains exhibit reduced uronic acid levels, indicative of capsule production. C_LIO_LISdiA mutants show enhanced intracellular survival and higher macrophage death. C_LIO_LIMutant infected macrophages have higher NF-{kappa}B, TNF, and CXCL10 responses. C_LIO_LISdiA-deficient strains lose predatory capacity against E. coli. C_LI

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
mBio
750 papers in training set
Top 0.4%
22.1%
2
PLOS Pathogens
721 papers in training set
Top 1%
10.3%
3
mSystems
361 papers in training set
Top 0.8%
9.9%
4
Molecular Microbiology
66 papers in training set
Top 0.1%
6.3%
5
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 0.6%
4.8%
50% of probability mass above
6
Cell Reports
1338 papers in training set
Top 16%
3.5%
7
microLife
19 papers in training set
Top 0.1%
3.5%
8
Infection and Immunity
103 papers in training set
Top 0.2%
2.8%
9
Nature Communications
4913 papers in training set
Top 44%
2.7%
10
eLife
5422 papers in training set
Top 36%
2.0%
11
mSphere
281 papers in training set
Top 3%
1.9%
12
Microbiology
57 papers in training set
Top 0.6%
1.7%
13
Microbiology Spectrum
435 papers in training set
Top 3%
1.7%
14
Journal of Bacteriology
190 papers in training set
Top 0.5%
1.7%
15
Frontiers in Microbiology
375 papers in training set
Top 6%
1.5%
16
Cell Host & Microbe
113 papers in training set
Top 3%
1.5%
17
The Journal of Infectious Diseases
182 papers in training set
Top 3%
1.3%
18
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 37%
1.3%
19
Disease Models & Mechanisms
119 papers in training set
Top 2%
1.2%
20
Cellular Microbiology
18 papers in training set
Top 0.1%
1.1%
21
Gut Microbes
70 papers in training set
Top 0.8%
0.9%
22
Nucleic Acids Research
1128 papers in training set
Top 15%
0.9%
23
PLOS Biology
408 papers in training set
Top 16%
0.9%
24
Nature Microbiology
133 papers in training set
Top 4%
0.8%
25
Journal of Leukocyte Biology
40 papers in training set
Top 0.5%
0.7%
26
PLOS Computational Biology
1633 papers in training set
Top 28%
0.6%
27
PLOS Genetics
756 papers in training set
Top 17%
0.6%