Back

Global identification of neuronal and astrocytic integral membrane proteins that require Retromer for their endosomal recycling.

Jones, E.; Adams, H.; Chen, K.-E.; Maroof, F.; Ibbotson, T. M.; Nakamura, Y.; Banks, P. J.; Healy, M. D.; Lewis, P. A.; Heesom, K. J.; Collins, B. M.; Wilkinson, K. A.; Cullen, P. J.; McMillan, K. J.

2026-05-18 molecular biology
10.64898/2026.05.14.724903 bioRxiv
Show abstract

Efficient transport of membrane proteins through the endosomal network is essential for brain development and function, with perturbation implicated in disease. Deficiencies in Retromer, a key regulator of endosomal transport, have been linked to aging-related neurodegenerative disorders including Alzheimers and Parkinsons disease. To better define the neuroprotective role of Retromer, we have applied cell surface restricted proteomics to identify those integral membrane proteins whose recycling to the plasma membrane is mediated by Retromer and associated cargo adaptors, sorting nexin 3 (SNX3), its paralogue sorting nexin 12 (SNX12), and sorting nexin 27 (SNX27) (data available via ProteomeXchange: PXD078277). By comparing primary rat cortical neurons and astrocytes we have identified several cargoes that require either SNX3/SNX12- or SNX27-Retromer complexes for endosomal recycling, including proteins involved in synapse organisation, synaptic signalling and Alzheimers disease pathology. We highlight that perturbed Retromer function leads to endosomal enlargement, and we establish a key role of SNX27-Retromer in modulating transport of glutamate across both neuronal and astrocytic membranes via recycling of glutamate transporters EAAT3 (SLC1A1) and EAAT1 (SLC1A3) respectively. Our study provides further mechanistic insight into the consequences of Retromer deficiency for neuronal and astrocytic function, offering new avenues of research in the treatment of neurodegenerative disease. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=194 SRC="FIGDIR/small/724903v1_ufig1.gif" ALT="Figure 1"> View larger version (59K): org.highwire.dtl.DTLVardef@98277forg.highwire.dtl.DTLVardef@1490534org.highwire.dtl.DTLVardef@f4a9feorg.highwire.dtl.DTLVardef@c48402_HPS_FORMAT_FIGEXP M_FIG O_FLOATNOGraphical AbstractC_FLOATNO Suppression of Retromer and the sorting nexins (SNX27, SNX3/SNX12) leads to a significant change in the surface proteome of rat cortical neurons and astrocytes. Focusing on the glutamate transporters, SLC1A1 and SLC1A3, we have validated that SNX27-Retromer is required for their trafficking, with SNX27-Retromer suppression in astrocytes leading to a loss of glutamate uptake. C_FIG

Matching journals

The top 14 journals account for 50% of the predicted probability mass.

1
Neurobiology of Disease
134 papers in training set
Top 0.3%
12.6%
2
International Journal of Molecular Sciences
453 papers in training set
Top 1%
4.9%
3
Journal of Proteome Research
215 papers in training set
Top 0.7%
4.0%
4
Journal of Neurochemistry
50 papers in training set
Top 0.1%
3.7%
5
eLife
5422 papers in training set
Top 24%
3.7%
6
Nature Communications
4913 papers in training set
Top 39%
3.7%
7
iScience
1063 papers in training set
Top 7%
2.8%
8
Cells
232 papers in training set
Top 1%
2.6%
9
Cell Reports
1338 papers in training set
Top 19%
2.6%
10
PLOS ONE
4510 papers in training set
Top 46%
2.4%
11
The EMBO Journal
267 papers in training set
Top 0.9%
2.1%
12
Journal of Molecular Biology
217 papers in training set
Top 1%
2.1%
13
Glia
74 papers in training set
Top 0.2%
1.9%
14
Cell Chemical Biology
81 papers in training set
Top 1%
1.8%
50% of probability mass above
15
Molecular & Cellular Proteomics
158 papers in training set
Top 1%
1.7%
16
Journal of Biological Chemistry
641 papers in training set
Top 2%
1.7%
17
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 4%
1.7%
18
Stem Cell Reports
118 papers in training set
Top 0.5%
1.5%
19
Journal of Cell Science
353 papers in training set
Top 1%
1.5%
20
Life Science Alliance
263 papers in training set
Top 0.5%
1.4%
21
npj Parkinson's Disease
89 papers in training set
Top 0.8%
1.4%
22
Molecular Omics
21 papers in training set
Top 0.1%
1.4%
23
Frontiers in Molecular Biosciences
100 papers in training set
Top 3%
1.2%
24
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
28 papers in training set
Top 0.3%
1.0%
25
ACS Chemical Biology
150 papers in training set
Top 1%
1.0%
26
Journal of Extracellular Vesicles
50 papers in training set
Top 0.3%
0.9%
27
EMBO reports
136 papers in training set
Top 5%
0.8%
28
Cellular and Molecular Life Sciences
84 papers in training set
Top 0.5%
0.8%
29
Journal of Cellular Biochemistry
10 papers in training set
Top 0.1%
0.8%
30
Neurotherapeutics
11 papers in training set
Top 0.4%
0.8%