Back

A High-Fidelity 3D Fluid-Structure Interaction Framework for Predictive Microfluidic Design

Shen, L.; Zhang, Y.; Chen, Y.; Ding, X.; Wen, P.; Wang, C.; Sun, P.; Gong, S.; Xu, J.; Han, J.; Chen, Y.

2026-04-30 bioengineering
10.64898/2026.04.28.721227 bioRxiv
Show abstract

The commercial maturation of microfluidics remains bottlenecked by empirical prototyping and an absence of predictive digital design capabilities. Because optimizing advanced technologies such as passive particle separation fundamentally hinges on the precise coupling of fluid dynamics and particle mechanics, conventional two-dimensional or decoupled fluid simulations inherently fail to capture authentic multiscale behaviors. To bridge this gap, we establish a high-fidelity three-dimensional fluid-structure interaction framework combining a high-order Arbitrary Lagrangian-Eulerian mapping-based finite element method with a localized hierarchical dynamic mesh strategy. Engineered to accurately resolve complex multiscale hydrodynamics, this architecture utilizes deterministic lateral displacement structures as a stringent test case. Validated against experimental data for rigid microspheres and tumor cells, the framework predicts transport trajectories and critical separation diameters with sub-micron precision. Crucially, the simulation explicitly resolves the M-shaped spatial fluctuation of local size thresholds alongside the dynamic vertical migration of particles. Unveiling these hidden physical mechanisms provides a deterministic explanation for highly debated phenomena such as mixed-mode transport. By enabling the rigorous in silico evaluation of complex non-periodic architectures, this framework serves as a powerful instrument for predictive structural optimization. Such capabilities establish the essential infrastructure for microfluidic digital design, accelerating the transition from empirical trial-and-error to precision simulation-driven engineering.

Matching journals

The top 4 journals account for 50% of the predicted probability mass.

1
Advanced Science
249 papers in training set
Top 0.1%
23.2%
2
Nature Communications
4913 papers in training set
Top 13%
12.9%
3
ACS Nano
99 papers in training set
Top 0.2%
10.4%
4
Cell Systems
167 papers in training set
Top 2%
7.0%
50% of probability mass above
5
Advanced Materials
53 papers in training set
Top 0.7%
3.7%
6
Small
70 papers in training set
Top 0.2%
2.8%
7
Nature Biomedical Engineering
42 papers in training set
Top 0.4%
2.7%
8
Advanced Functional Materials
41 papers in training set
Top 1%
2.1%
9
Science Advances
1098 papers in training set
Top 12%
2.1%
10
Nano Letters
63 papers in training set
Top 1%
1.9%
11
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 30%
1.8%
12
Lab on a Chip
88 papers in training set
Top 0.6%
1.7%
13
APL Bioengineering
18 papers in training set
Top 0.1%
1.7%
14
Nature Materials
21 papers in training set
Top 0.5%
1.5%
15
Nature Nanotechnology
30 papers in training set
Top 0.8%
1.3%
16
Journal of the American Chemical Society
199 papers in training set
Top 4%
1.3%
17
Communications Biology
886 papers in training set
Top 18%
0.9%
18
Nature Biotechnology
147 papers in training set
Top 7%
0.8%
19
Angewandte Chemie International Edition
81 papers in training set
Top 3%
0.8%
20
Cell Reports
1338 papers in training set
Top 33%
0.7%
21
Biofabrication
32 papers in training set
Top 0.8%
0.7%
22
Nature Machine Intelligence
61 papers in training set
Top 4%
0.7%
23
PLOS ONE
4510 papers in training set
Top 72%
0.5%
24
Nature Physics
39 papers in training set
Top 1%
0.5%
25
eLife
5422 papers in training set
Top 63%
0.5%
26
Science
429 papers in training set
Top 22%
0.5%
27
Advanced Healthcare Materials
71 papers in training set
Top 2%
0.5%
28
Developmental Cell
168 papers in training set
Top 13%
0.5%
29
Cell Reports Physical Science
18 papers in training set
Top 1%
0.5%