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Dietary Sodium Restriction Reprograms Gut Microbial Fermentation and Reduces Host Energy Harvest

Cornman-Homonoff, J.; Rajendran, K. M.; Kolandaivelu, S.; Coon, S. D.; Kupec, J. T.; Wang, L.; Hu, G.; Jala, V. R.; Sandle, G. I.; Rajendran, V. M.

2026-04-21 microbiology
10.64898/2026.04.20.719706 bioRxiv
Show abstract

Diet is a major determinant of gut microbiome structure and function, yet the role of dietary electrolytes--particularly sodium--remains poorly defined. Here, we identify dietary sodium availability as a key regulator of gut microbial fermentation and host energy harvest. Using a controlled sodium-sufficient versus sodium-deprived dietary intervention in rats, we integrated shotgun metagenomic sequencing, functional pathway analysis, targeted short-chain fatty acid (SCFA) quantification, and host physiological phenotyping. Sodium deprivation induced a coordinated restructuring of the gut microbiome, characterized by depletion of classical saccharolytic Firmicutes, including multiple Lactobacillus species, and enrichment of stress-tolerant, metabolically flexible taxa. Functional profiling revealed a shift away from growth-associated metabolic programs toward stress-adaptive and nutrient-scavenging pathways. Consistent with these changes, fecal concentrations of key SCFAs--including acetate, butyrate, hexanoate, and valerate--were significantly reduced, indicating impaired microbial fermentative capacity. These microbiome-level alterations translated into measurable host phenotypes, including reduced cecal mass and attenuated weight gain, consistent with decreased microbial energy harvest. Together, these findings establish a functional link between luminal sodium availability, microbial metabolic efficiency, and host energy balance, extending the framework of diet-microbiome interactions beyond macronutrients to include dietary electrolytes. This work identifies sodium as a previously underappreciated ecological constraint shaping gut microbial metabolism and suggests that modulation of dietary sodium intake may influence host metabolic outcomes through microbiome-mediated mechanisms.

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