Back

Quantitative imaging of calcium dynamics with a green fluorescent biosensor and fluorescence lifetime imaging

Caldarola, A.; Palacios Martinez, S.; Goedhart, J.

2026-04-13 cell biology
10.64898/2026.04.10.717680 bioRxiv
Show abstract

Genetically encoded biosensors are GFP-based tools that can visualize the dynamics and spatial features of cellular processes. The design of a genetically encoded biosensor dictates the method that is used to measure the response. Common read-outs use some sort of fluorescence intensity measurement, which is subject to both technical and biological perturbations, including sample drift, excitation power fluctuations, changes in sample size/volume, or a change in expression level. Yet, the fluorescence lifetime of a fluorophore is not affected by the aforementioned perturbations. Therefore, biosensors that respond with a large lifetime change offer a more robust method of detecting cellular processes. Here, we report on protocols for calcium imaging using fluorescence lifetime imaging microscopy (FLIM) to measure the response of a genetically encoded lifetime biosensor. The protocols include details on biosensor production and purification, calibration of purified biosensor with FLIM, introduction of the plasmid in HeLa and endothelial cells, and timelapse analysis of FLIM data. In this chapter we use the green fluorescent biosensor G-Ca-FLITS as an example but the protocols can be generally applied to biosensors with lifetime contrast. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=139 SRC="FIGDIR/small/717680v1_ufig1.gif" ALT="Figure 1"> View larger version (39K): org.highwire.dtl.DTLVardef@179c1cborg.highwire.dtl.DTLVardef@a20aacorg.highwire.dtl.DTLVardef@6ab811org.highwire.dtl.DTLVardef@5a9fcd_HPS_FORMAT_FIGEXP M_FIG C_FIG

Matching journals

The top 9 journals account for 50% of the predicted probability mass.

1
PLOS ONE
4510 papers in training set
Top 16%
12.3%
2
Sensors
39 papers in training set
Top 0.2%
6.8%
3
ACS Sensors
45 papers in training set
Top 0.3%
6.3%
4
Biophysical Journal
545 papers in training set
Top 0.9%
6.3%
5
Journal of Microscopy
18 papers in training set
Top 0.1%
4.8%
6
Journal of Visualized Experiments
30 papers in training set
Top 0.1%
4.8%
7
Current Protocols
13 papers in training set
Top 0.1%
3.6%
8
Scientific Reports
3102 papers in training set
Top 41%
3.1%
9
Advanced Biology
29 papers in training set
Top 0.2%
2.4%
50% of probability mass above
10
Journal of Biophotonics
16 papers in training set
Top 0.2%
2.1%
11
Biomedical Optics Express
84 papers in training set
Top 0.6%
2.1%
12
HardwareX
16 papers in training set
Top 0.1%
2.1%
13
MethodsX
14 papers in training set
Top 0.1%
1.7%
14
Biosensors and Bioelectronics
52 papers in training set
Top 0.9%
1.5%
15
Molecular Biology of the Cell
272 papers in training set
Top 2%
1.5%
16
SLAS Technology
11 papers in training set
Top 0.1%
1.3%
17
SoftwareX
15 papers in training set
Top 0.2%
1.3%
18
Physical Biology
43 papers in training set
Top 1%
1.3%
19
Biology Open
130 papers in training set
Top 1%
1.3%
20
Biology of the Cell
11 papers in training set
Top 0.1%
1.2%
21
Cells
232 papers in training set
Top 5%
0.9%
22
Biology Methods and Protocols
53 papers in training set
Top 2%
0.9%
23
STAR Protocols
15 papers in training set
Top 0.1%
0.9%
24
Frontiers in Physiology
93 papers in training set
Top 5%
0.9%
25
Optics Express
23 papers in training set
Top 0.4%
0.9%
26
eLife
5422 papers in training set
Top 53%
0.9%
27
Journal of Cell Biology
333 papers in training set
Top 4%
0.8%
28
Biological Imaging
15 papers in training set
Top 0.2%
0.7%
29
Computational and Structural Biotechnology Journal
216 papers in training set
Top 9%
0.7%
30
Methods
29 papers in training set
Top 0.6%
0.7%