Back

Dysplastic Epithelial Repair Propagates Chronic Pathology Through the Paracrine Transformation of Pulmonary Fibroblasts

Holcomb, N. P.; Samuel, R. Z.; Klochkova, A.; Wong, J.; Kass Gergi, S.; Mendoza, M.; Maideen, M. M.; Martinez, E. A.; Abraham, D. M.; Singh, M.; Kelam, H.; Zepp, J. A.; Vaughan, A. E.

2026-04-05 cell biology
10.64898/2026.04.02.716135 bioRxiv
Show abstract

Severe lung injury promotes the ectopic accumulation of basal cells in the alveoli and the presence of these dysplastic epithelial cells are strongly associated with regions of pulmonary fibrosis (PF) in diseased lungs. Recent studies have identified a unique subset of "inflammatory" fibroblasts expressing pro-inflammatory genes, especially cytokines involved in monocyte recruitment, that are also enriched in disease and thought to contribute to the onset and progression of PF. Here we show that these two injury-induced cell types are intricately connected, in that dysplastic basal cells generate diffusible signals to robustly induce the inflammatory phenotype in pulmonary fibroblasts. Capitalizing on transcriptomic analysis, we identify the enriched inflammatory signaling pathways in treated fibroblasts and specifically demonstrate that IL-1 secreted by dysplastic basal cells is responsible for this fibroblastic transformation. IL-1 neutralization in vivo is sufficient to significantly reduce the inflammatory fibroblast burden in regions of alveolar bronchiolization, and the resolution of inflammatory fibroblasts in turn reduces CCR2+ immune cell recruitment to these areas. These results suggest dysplastic basal cells play an indirect role in chronic inflammation and fibrotic remodeling through the induction of a proinflammatory fibroblast phenotype and subsequent recruitment of immune cells, establishing a chronic wound healing microenvironment that prolongs localized pathologic remodeling.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
Developmental Cell
168 papers in training set
Top 0.7%
17.9%
2
Nature Communications
4913 papers in training set
Top 17%
10.2%
3
eLife
5422 papers in training set
Top 9%
8.2%
4
JCI Insight
241 papers in training set
Top 0.4%
7.0%
5
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 10%
6.7%
6
Journal of Experimental Medicine
106 papers in training set
Top 0.4%
6.2%
50% of probability mass above
7
Cell Reports
1338 papers in training set
Top 8%
6.2%
8
Science Advances
1098 papers in training set
Top 8%
3.2%
9
Nature Cell Biology
99 papers in training set
Top 2%
3.2%
10
EMBO reports
136 papers in training set
Top 1%
3.0%
11
Journal of Clinical Investigation
164 papers in training set
Top 2%
2.7%
12
Immunity
58 papers in training set
Top 3%
1.7%
13
American Journal of Respiratory and Critical Care Medicine
39 papers in training set
Top 0.6%
1.5%
14
Cell Host & Microbe
113 papers in training set
Top 4%
1.2%
15
Science Translational Medicine
111 papers in training set
Top 5%
0.9%
16
American Journal of Respiratory Cell and Molecular Biology
38 papers in training set
Top 0.6%
0.9%
17
Cell Stem Cell
57 papers in training set
Top 2%
0.9%
18
PLOS Biology
408 papers in training set
Top 19%
0.8%
19
Nature Immunology
71 papers in training set
Top 2%
0.7%
20
Advanced Science
249 papers in training set
Top 20%
0.7%
21
Cell Systems
167 papers in training set
Top 14%
0.6%
22
The EMBO Journal
267 papers in training set
Top 7%
0.6%
23
iScience
1063 papers in training set
Top 38%
0.6%