Back

Modulating radical propagation in proteins by proton-coupled electron transfer and hydrogen bonding

Zawistowski, R. K.; Chauvire, T.; Manna, S.; Ananth, N.; CRANE, B. R.

2026-03-17 biochemistry
10.64898/2026.03.14.711208 bioRxiv
Show abstract

Long-range protein electron transfer (ET) often depends on tryptophan and tyrosine residues acting as radical relay sites. For example, cytochrome c peroxidase (CcP) generates a W191*+ radical to increase ET from cytochrome c (Cc) to the active center. W191 substitution to Tyr reduces ET rates, but introduction of an adjacent general base at position 232 (as Glu or His) recovers activity. E232 fluorination shifts the ET pH dependence to lower values, verifying that a hydrogen bond elevates the Y191* formal potential for effective ET. Photoinitiated ET between Zn-porphyrin (ZnP) CcP (ZnCcP) and Cc also depends on activating Y191 with a basic residue, but through a different mechanism than for the peroxide-driven system. In ZnCcP, pH dependencies and solvent isotope effects indicate that proton-coupled electron transfer to the basic residue and ZnP*+, respectively, facilitate Y191* formation. Replacing Cc with the irreversible oxidant [Co(NH3)5Cl]2+ isolates distinct protein radicals for characterization by Electron Paramagnetic Resonance (EPR) spectroscopy. Radical distributions reveal that W191*+ lies [~]15 mV in potential below ZnP*+ and that the two radicals exchange on a slow time scale despite their close separation. Remarkably, ZnCcP Y,G191:E,H232 variants propagate radicals differently to peripheral sites depending on the nature of the 232 residue. QM/MM calculations support radical exchange between ZnP*+/Trp*+ and the importance of a hydrogen bond to Y191* for maintaining a high potential to oxidize peripheral donors. These resolved reactivity patterns of CcP/ZnCcP have general relevance for engineering proton management to separate and migrate charge in proteins and potentially other molecular systems.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
Journal of the American Chemical Society
199 papers in training set
Top 0.2%
18.1%
2
Chemical Science
71 papers in training set
Top 0.1%
14.0%
3
Nature Communications
4913 papers in training set
Top 21%
8.9%
4
The Journal of Physical Chemistry Letters
58 papers in training set
Top 0.2%
6.2%
5
Redox Biology
64 papers in training set
Top 0.1%
4.2%
50% of probability mass above
6
ChemBioChem
50 papers in training set
Top 0.2%
3.9%
7
eLife
5422 papers in training set
Top 30%
3.0%
8
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 24%
2.8%
9
ACS Central Science
66 papers in training set
Top 0.6%
2.5%
10
Biochemistry
130 papers in training set
Top 0.6%
2.3%
11
Chemical Communications
24 papers in training set
Top 0.4%
2.0%
12
Protein Science
221 papers in training set
Top 0.7%
2.0%
13
Angewandte Chemie International Edition
81 papers in training set
Top 2%
1.7%
14
Biochimica et Biophysica Acta (BBA) - Bioenergetics
17 papers in training set
Top 0.1%
1.7%
15
Nucleic Acids Research
1128 papers in training set
Top 11%
1.7%
16
Journal of Molecular Biology
217 papers in training set
Top 2%
1.4%
17
Nature Chemistry
34 papers in training set
Top 0.5%
1.4%
18
Structure
175 papers in training set
Top 2%
1.4%
19
Journal of Chemical Information and Modeling
207 papers in training set
Top 2%
1.4%
20
The Journal of Physical Chemistry B
158 papers in training set
Top 1%
1.3%
21
JACS Au
35 papers in training set
Top 0.7%
1.2%
22
Scientific Reports
3102 papers in training set
Top 70%
0.9%
23
RSC Chemical Biology
32 papers in training set
Top 0.4%
0.9%
24
Nature Chemical Biology
104 papers in training set
Top 3%
0.9%
25
Physical Chemistry Chemical Physics
34 papers in training set
Top 0.6%
0.9%
26
Biophysical Journal
545 papers in training set
Top 5%
0.7%
27
Proceedings of the Royal Society B: Biological Sciences
341 papers in training set
Top 7%
0.7%
28
Communications Biology
886 papers in training set
Top 27%
0.7%
29
Science Advances
1098 papers in training set
Top 33%
0.6%