Back

Single-cell multi-omic profiling allows the dissection of peripheral immune phenotypes in Alzheimers Disease progression

Spintge, J. B.; Mai, K.; Carraro, C.; van Uelft, M.; Elli, F.; Mauer, K.; Holsten, L.; Frolov, A.; Elangikal, J.; Hinkley, E.; Schulte-Schrepping, J.; Shakiba, M. H.; Lang, L.; Elmzzahi, T.; Hamada, D.; Müller, S.; Li, Y.; Gemünd, I.; Kröger, C.; Leidner, J.; Zajac, T.; Montgomery, J. V.; Hartmann, C.; Hussein, B.; Büttner, M.; Knoll, R.; Hüsson, D.; Scholz, R.; Paschek, T.; Isakzai, V.; Reusch, N.; Paulusch, S.; Drews, A.; Kraut, M.; Theis, H.; Rüthing, M.; Strube, U.; Preis, L.; Gref, D.; Spruth, E. J.; Gemenetzi, M.; Fliessbach, K.; Hansen, N.; Rostamzadeh, A.; Glanz, W.; Incesoy, E.

2026-03-13 neurology
10.64898/2026.03.12.26348228 medRxiv
Show abstract

The role of the peripheral immune system in Alzheimers Disease (AD) remains insufficiently resolved, limiting the understanding of systemic disease effects and mechanisms. Here, we employed three high-resolution single-cell techniques, including flow cytometry, single-cell RNA- and ATAC-sequencing, to investigate peripheral immunity in AD dementia and earlier stages of the AD trajectory in over 100 patients. We identified reduced humoral immune responses in AD, characterized by a diminished B cell compartment displaying an impaired activation phenotype. Classical monocytes expanded in mild cognitive impairment and early AD dementia, acquiring a NF-kB/AP-1-mediated low-grade inflammation phenotype. Our findings link peripheral dysregulation in innate and adaptive immunity at cell frequency, transcriptional and epigenetic levels to the AD trajectory and provide insights into distinct phenotypes that define AD progression in contrast to healthy aging across cohorts.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
Nature Aging
51 papers in training set
Top 0.1%
14.4%
2
Nature Communications
4913 papers in training set
Top 12%
14.1%
3
Alzheimer's & Dementia
143 papers in training set
Top 0.8%
8.2%
4
Cell Stem Cell
57 papers in training set
Top 0.2%
6.7%
5
Nature Genetics
240 papers in training set
Top 1%
6.2%
6
Cell Metabolism
49 papers in training set
Top 0.3%
4.8%
50% of probability mass above
7
Nature Medicine
117 papers in training set
Top 0.7%
3.9%
8
Advanced Science
249 papers in training set
Top 5%
3.9%
9
EMBO Molecular Medicine
85 papers in training set
Top 0.6%
3.5%
10
Nucleic Acids Research
1128 papers in training set
Top 10%
1.8%
11
Nature Neuroscience
216 papers in training set
Top 4%
1.7%
12
Neuron
282 papers in training set
Top 6%
1.7%
13
eLife
5422 papers in training set
Top 43%
1.7%
14
Brain
154 papers in training set
Top 3%
1.6%
15
Science Translational Medicine
111 papers in training set
Top 3%
1.6%
16
Molecular Psychiatry
242 papers in training set
Top 2%
1.6%
17
Nature
575 papers in training set
Top 12%
1.5%
18
Cell Reports
1338 papers in training set
Top 26%
1.5%
19
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 37%
1.3%
20
Aging Cell
144 papers in training set
Top 2%
1.1%
21
Genome Medicine
154 papers in training set
Top 7%
0.9%
22
eBioMedicine
130 papers in training set
Top 3%
0.9%
23
Nature Biomedical Engineering
42 papers in training set
Top 2%
0.9%
24
Alzheimer's Research & Therapy
52 papers in training set
Top 2%
0.9%
25
Acta Neuropathologica
51 papers in training set
Top 1%
0.7%
26
Cell Reports Medicine
140 papers in training set
Top 8%
0.7%
27
Communications Biology
886 papers in training set
Top 25%
0.7%
28
Nature Cancer
35 papers in training set
Top 1%
0.7%
29
Immunity
58 papers in training set
Top 5%
0.6%