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Guarding versus self-guarding in innate immunity

Ashby, B.; Anderson, A.

2026-03-12 evolutionary biology
10.64898/2026.03.10.710826 bioRxiv
Show abstract

Hosts have evolved a variety of innate immune responses to pathogens. In many cases, hosts directly detect pathogen-associated molecular patterns (PAMPs) or pathogen effectors to trigger an immune response. However, hosts may also detect pathogens indirectly through guarding, whereby immune receptors monitor the effects of pathogens rather than the pathogens themselves. Guarding likely represents a more difficult evolutionary challenge for pathogens than direct recognition of PAMPs, as infection may require modifying or disrupting guarded host proteins. Recently, self-guarding has been discovered, in which the host target functions as both guard and guardee. Self-guarding appears to present an intractable problem for pathogens: modification of the host target may benefit replication, but also triggers an immune response. If self-guarding creates an apparently inescapable detection mechanism, why are most guarding systems composed of separate guards and guardees? Here, we use mathematical models of within-host pathogen and immune dynamics to compare guarding and self-guarding architectures. We show that self-guarding leads to a more rapid immune response and faster pathogen suppression, but is also more prone to false-positive immune responses, likely imposing greater costs through autoimmunity. We therefore hypothesise that the greater potential for false-positive immune responses may explain the relative scarcity of self-guarding.

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