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A new mRNA antigen vaccine induces potent B and T cell responses and in vivo protection against SARS-CoV-2

Wen, J.; Moon, J.; Tucciarone, L.; Bu, T.-H.; Sun, A. Y.; Miller, R.; Timis, J.; Wu, L.; Smith, D. M.; Shresta, S.; Gaulton, K. J.; Rana, T. M.

2026-03-03 immunology
10.64898/2026.03.02.709177 bioRxiv
Show abstract

The SARS-CoV-2 mRNA vaccine provides effective protection against viral infection and severe disease by inducing efficient adaptive immunity. However, vaccine efficacy is decreased against emerging variants, and immune memory is relatively short-lived. Here, we added new T cell epitopes to the RBD (receptor-binding domain) mRNA vaccine and identified a SARS-CoV-2 membrane epitope that significantly improved vaccine-induced immunity and protection in vivo. That new vaccine, designated G1-C, induced 8.2-fold higher levels of RBD-specific antibodies than did RBD and enhanced spike-specific T cell and B cell responses. Remarkably, the G1-C modulated hematopoietic stem cell (HSC) differentiation and increased levels of B and NK cells by regulating multiple signaling pathways in bone marrow potentially via Fos, Klf4, and Klf6 transcription factors. Altogether, these findings identify a new vaccine candidate to control viral infection by affecting the lymphoid-myeloid lineage bias and suggest the potential role of T cell epitopes in vaccine design and development.

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