Back

Assessment of inter-individual variation in metabolism of flavonoids from bilberry and grape seed extracts using an in vitro digestion and faecal fermentation model

Grohmann, T.; Kroon, P. A.; Mark, P.; Horgan, G.; Zhang, X.; Balaseviciute, U.; Walker, A. W.; Russell, W. R.; Hoggard, N.; de Roos, B.

2026-03-03 microbiology
10.64898/2026.03.02.709000 bioRxiv
Show abstract

The gut microbiota plays an essential role in the conversion of anthocyanins and (epi-)catechins into smaller phenolic acids, which are then absorbed into the blood stream. The phenolic composition of a commercial bilberry extract and grape seed extract was assessed, as well as a formulation extract containing a combination of both extracts. The extracts were subjected to an in vitro salivary, gastric and intestinal digestion environment, based on the INFOGEST Model. The solid fraction end-product of the combined extract from the in vitro digestion was further fermented with faecal samples from six healthy donors, for 72 hours, to assess phenolic acid metabolism, short-chain fatty acid formation and changes in microbial composition. During the in vitro digestion, flavonoid content in all three extract samples (bilberry, grape seed and the formulation extracts) decreased significantly. In the process of anthocyanin and flavonoid digestion, smaller phenolic acid compounds such as benzoic acid, cinnamic acid and mandelic acid increased in bilberry, grape seed and formulation extract samples. All faecal donors harboured unique microbiota compositions, however all faecal microbiota were able to fully convert catechin/epicatechin, the most prominent flavonoids in the formulation extract sample, into smaller phenolic metabolites (phenylacetic, phenylpropionic and benzoic acids) within 24 hours. Using 16S rRNA gene amplicon sequencing, Anaerobutyricum and Enterocloster spp. were correlated with catechin/epicatechin metabolism in the fermentation procedure, however, in single bacterial strain fermentation experiments with the formulation extract or catechin standard, these bacteria were not capable of metabolising flavonoids. HighlightsO_LIFaecal microbiota converted (epi-)catechin to phenolic metabolites within 24 h. C_LIO_LI(Epi-)catechin correlated negatively with Anaerobutyricum and Enterocloster spp. C_LIO_LIFaecal bacterial cultures did not show (epi-)catechin metabolism capacity. C_LI

Matching journals

The top 8 journals account for 50% of the predicted probability mass.

1
Food & Function
12 papers in training set
Top 0.1%
14.3%
2
Scientific Reports
3102 papers in training set
Top 10%
8.4%
3
Food Research International
11 papers in training set
Top 0.1%
6.4%
4
Frontiers in Microbiology
375 papers in training set
Top 1%
6.3%
5
Antibiotics
32 papers in training set
Top 0.3%
4.0%
6
BMC Microbiology
35 papers in training set
Top 0.1%
4.0%
7
mSphere
281 papers in training set
Top 1%
3.6%
8
International Journal of Food Microbiology
11 papers in training set
Top 0.1%
3.6%
50% of probability mass above
9
PLOS ONE
4510 papers in training set
Top 42%
3.1%
10
npj Biofilms and Microbiomes
56 papers in training set
Top 0.7%
2.4%
11
Microbial Biotechnology
29 papers in training set
Top 0.3%
2.1%
12
Microorganisms
101 papers in training set
Top 0.6%
1.8%
13
Applied and Environmental Microbiology
301 papers in training set
Top 2%
1.7%
14
Microbiology Spectrum
435 papers in training set
Top 3%
1.7%
15
Frontiers in Cellular and Infection Microbiology
98 papers in training set
Top 3%
1.7%
16
Microbiology
57 papers in training set
Top 0.7%
1.5%
17
mSystems
361 papers in training set
Top 5%
1.5%
18
Nutrients
64 papers in training set
Top 1%
1.5%
19
Applied Microbiology and Biotechnology
26 papers in training set
Top 0.1%
1.3%
20
PeerJ
261 papers in training set
Top 10%
1.2%
21
Gut Microbes
70 papers in training set
Top 0.7%
1.2%
22
Metabolites
50 papers in training set
Top 0.8%
0.9%
23
Microbiological Research
19 papers in training set
Top 0.5%
0.9%
24
Microbial Cell Factories
22 papers in training set
Top 0.4%
0.9%
25
Metabolomics
11 papers in training set
Top 0.4%
0.8%
26
Science of The Total Environment
179 papers in training set
Top 5%
0.8%
27
Nature Communications
4913 papers in training set
Top 63%
0.7%
28
International Journal of Molecular Sciences
453 papers in training set
Top 17%
0.7%
29
Microbiome
139 papers in training set
Top 3%
0.7%
30
Journal of Agricultural and Food Chemistry
14 papers in training set
Top 1%
0.7%