Back

Longitudinal in vivo human wound healing model defines key role for smooth muscle cells in ECM remodeling

Emmerich, K.; Suri, R.; Yang, D.; Liu, D.; Huffstutler, R.; Dmitrieva, N. I.; Cudrici, C. D.; Schwartzbeck, R.; Ferrante, E. A.; Hsu, I.; Kinoshita, M.; Goel, S.; Dalgard, C.; Nagao, K.; Pinto, A. R.; Boehm, M.; Harper, R. L.

2026-02-26 molecular biology
10.64898/2026.02.24.707845 bioRxiv
Show abstract

BackgroundEffective skin wound healing is essential for restoring tissue integrity following injury. Repair proceeds through phases of hemostasis, inflammation, proliferation, and remodeling, but molecular mechanisms governing these stages remain poorly defined. Vascular niche cells (VNCs)-including endothelial cells, vascular smooth muscle cells (SMCs), and fibroblasts-are central regulators of healing, but the lack of longitudinal in vivo human data has limited identification of VNC-derived signals that distinguish effective repair from pathological healing such as ulcers. Thus, defining the regulation of VNCs in wound healing addresses a critical knowledge gap. MethodsWe developed a protocol for wound healing using dermal forearm punch biopsies to track longitudinal repair in healthy volunteers. Single-cell and spatial transcriptomics were performed to identify and validate signaling activities within VNCs. ResultsWe spatiotemporally defined the inflammation, proliferation, and remodeling phases of human skin wound healing with a focus on VNCs. Spatial analysis localized this activity for VNCs and immune cells within a heterogenous granulation zone that later led to re-epithelializion. Angiogenesis was dominated by Vegf, Egf and Hif1 signaling. Extracellular matrix (ECM) remodeling occurred through Collagen, Laminin, Thrombospondin, and Fibronectin. SMCs emerged as dominant drivers of injury-induced remodeling including basement membrane and interstitial ECM components compared to fibroblasts. This SMC-led program was further defined by robust induction of TIMP1, an inhibitor of matrix degradation, which localized to granulation tissue and correlated with re-epithelialization and wound resolution. Lastly, we compared remodeling factors between healing and non-healing human diabetic foot ulcers (DFUs). SMCs in non-healing DFUs had deficient expression for core remodeling factors, including TIMP1, indicating SMC activity is needed for effective healing. ConclusionWe identified an SMC-driven model of wound repair in which TIMP1-dependent activity underpins granulation zone formation. Failure of this program defined a mechanistic basis for impaired healing in ulcers, identifying SMCs and TIMP1 as therapeutic targets.

Matching journals

The top 9 journals account for 50% of the predicted probability mass.

1
JCI Insight
241 papers in training set
Top 0.1%
10.9%
2
Nature Communications
4913 papers in training set
Top 16%
10.5%
3
Journal of Investigative Dermatology
42 papers in training set
Top 0.1%
6.6%
4
The FASEB Journal
175 papers in training set
Top 0.1%
5.1%
5
PLOS ONE
4510 papers in training set
Top 30%
5.1%
6
Scientific Reports
3102 papers in training set
Top 30%
4.0%
7
Matrix Biology
28 papers in training set
Top 0.1%
3.8%
8
Arthritis & Rheumatology
33 papers in training set
Top 0.2%
3.7%
9
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 24%
2.9%
50% of probability mass above
10
Cell Reports
1338 papers in training set
Top 18%
2.7%
11
Journal of Clinical Investigation
164 papers in training set
Top 3%
1.8%
12
Journal of Thrombosis and Haemostasis
28 papers in training set
Top 0.4%
1.4%
13
Developmental Cell
168 papers in training set
Top 9%
1.4%
14
BMJ Open Diabetes Research & Care
15 papers in training set
Top 0.6%
1.4%
15
npj Regenerative Medicine
21 papers in training set
Top 0.1%
1.4%
16
Frontiers in Immunology
586 papers in training set
Top 5%
1.3%
17
Science Translational Medicine
111 papers in training set
Top 5%
0.9%
18
Disease Models & Mechanisms
119 papers in training set
Top 2%
0.9%
19
Advanced Science
249 papers in training set
Top 17%
0.8%
20
BMC Medical Genomics
36 papers in training set
Top 1%
0.8%
21
The Journal of Infectious Diseases
182 papers in training set
Top 4%
0.8%
22
PLOS Computational Biology
1633 papers in training set
Top 24%
0.8%
23
Cell Reports Medicine
140 papers in training set
Top 7%
0.8%
24
Kidney International
25 papers in training set
Top 0.3%
0.8%
25
PLOS Genetics
756 papers in training set
Top 14%
0.8%
26
Investigative Ophthalmology & Visual Science
22 papers in training set
Top 0.3%
0.8%
27
eLife
5422 papers in training set
Top 57%
0.7%
28
Arteriosclerosis, Thrombosis, and Vascular Biology
65 papers in training set
Top 2%
0.7%
29
Journal of Travel Medicine
18 papers in training set
Top 0.3%
0.7%
30
Frontiers in Medicine
113 papers in training set
Top 7%
0.7%