Polar Marine Microbial Communities as Reservoirs of Polyester Degrading Enzymes
Grinen, A.; Cifuentes-Anticevic, J.; Buscaglia, M.; Vergara-Barros, P.; Verdejo, A. N.; Engelberger, F.; Ramirez-Sarmiento, C. A.; Diez, B.
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BackgroundPolyethylene terephthalate (PET) is one of the most widely used plastics and a major contributor to marine pollution. While the diversity of PET hydrolases (PETases), which degrade PET into mono(2-hydroxyethyl) terephthalate (MHET), terephthalate (TPA) and ethylene glycol, has been documented in temperate and tropical waters, their potential presence in polar oceans remain unascertained. ResultsHere, we systematically screened polar and non-polar marine metagenomes using Hidden Markov models (HMM) generated using experimentally validated PETases. We identified >680 putative PETase-like sequences, with Antarctic and Arctic candidates enriched in high-fidelity motifs associated with PETase-like activity. Phylogenetic and structural analyses defined a high-confidence PETase-like clade comprising both Type I and Type II enzymes, differing in thermostability-related features and PET-binding motifs. Experimental assays confirmed polyesterase activity in 5/9 candidates from this clade, including polar-derived variants active at 14-25{degrees}C. Downstream enzymes for PET consumption were also widespread, detecting 209 putative MHET hydrolases and 442 TPA-catabolyzing enzymes. Further, we reconstructed 112 metagenome-assembled genomes (MAGs) carrying at least one PETase-like gene, more than half from polar datasets. Notably, 15 MAGs encoded multiple PETase-like enzymes, and 1 Antarctic MAG harbored a complete PETase-MHETase-TPA pathway, evidencing a fully integrated degradation potential in cold-adapted taxa. ConclusionsTogether, these results demonstrate that polar oceans act as previously overlooked reservoirs of taxonomically and functionally diverse plastic-degrading enzymes. The enrichment of PETase-like enzymes and downstream pathways in polar microbial communities expands the global biogeography of plastic biodegradation and highlights cold-active enzymes as promising candidates for developing low-temperature plastic bioremediation strategies.
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