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The practical impact of numerical variability on structural MRI measures of Parkinson's disease

Chatelain, Y. M. B.; Sokołowski, A.; Sharp, M.; Poline, J.-B.; Glatard, T.

2026-01-09 bioinformatics
10.64898/2026.01.09.698203 bioRxiv
Show abstract

Numerical variability is rarely quantified in neuroimaging despite many measures relying on subtle morphometric differences across individuals. We instrumented FreeSurfer, a widely used neuroimaging pipeline, to simulate numerical differences across computational environments, and used it to measure numerical variability in MRI analyses of Parkinsons disease patients and controls. In multiple cortical and subcortical regions, numerical variation reached nearly one-third of the population variability, altering statistical conclusions about group differences and clinical associations. To assess the impact of numerical noise in existing studies, we developed a practical tool that estimates the Numerical-Population Variability Ratio (NPVR) in a study, and propagates the resulting numerical uncertainty to common statistics and associated p-values. By applying this framework to thirteen previously published studies reporting MRI measures in Parkinsons disease, we quantified the probability of numerically induced false positives and false negatives in the literature, highlighting a substantial impact of numerical variability on MRI measures of Parkinsons disease. These results underscore the importance of systematically evaluating numerical stability in neuroimaging and provides a practical framework to do so.

Published in Scientific Reports (predicted rank #5) · training set

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