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HONeD-in on Brain Activity: Deconvolving Passive Diffusion on the Structural Network from Functional Brain Signals

Sipes, B. S.; Arab, F.; Nagarajan, S.; Raj, A.

2026-01-05 neuroscience
10.64898/2026.01.05.697753 bioRxiv
Show abstract

Brain regions perform distinct computations, and their signals propagate through the whole-brain white matter network. Yet, mathematical models that describe this signal propagation via purely passive diffusion can predict a considerable amount of the observed functional connectivity between regions. This raises a critical question: if so much functional connectivity can be explained by a passive process, how can we isolate the active process? Here, we calculate in closed-form an estimate for such an active signal in functional MRI by spatially deconvolving the effect of passive signal spread over the brains structural connectivity using a higher-order network diffusion (HONeD) model. Across 770 Human Connectome Project subjects, we show that the resulting HONeD-innovation (HONeD-in) signal 1) sparsifies functional connectivity while retaining a well-connected network, 2) remodels resting-state networks (RSNs), 3) mixes the unimodal- multimodal hierarchical organization of RSNs into a circle with no clear hierarchy, and 4) deblurs task-activation maps. Together, our results highlight HONeD deconvolution as a generalizable new way to study resting-state and task fMRI brain signals.

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