Back

Two Steps Away From Extinction: Do You Believe?

de Padua, K. A. S.; Teixeira, T. M.; Nazareno, A. G.

2025-12-14 genomics
10.64898/2025.12.10.693505 bioRxiv
Show abstract

Forest fragmentation can have detrimental effects on plant populations, reducing population sizes and depleting genetic diversity, as a consequence. As a matter of urgency, it is crucial to assess the effects of forest fragmentation on genetics and ecological processes, particularly for threatened species on the brink of extinction. Here, we examined the responses of Dinizia jueirana-facao G. P. Lewis & G. S. Siqueira (Fabaceae, Caesalpinioideae) - a rare and critically endangered tree species endemic to the Brazilian Atlantic Forest-, to forest fragmentation. Based on theoretical predictions for barochory plant species with small population sizes, we hypothesized that forest fragmentation would reduce gene flow, erode genetic diversity, and negatively impact demography. Using neutral SNPs (Single Nucleotide Polymorphisms) derived from ddRADSeq (double-digest restriction site-associated DNA sequencing), we found that pollen dispersal occurred within short distances, with the majority of outcrossed pollination events occurring locally. Furthermore, contemporary estimates of gene dispersal distances were lower than historical ones, indicating a seasonal shift in the scale of gene flow due to recent forest fragmentation. Our results also indicated no evidence of inbreeding and loss of genetic diversity. In terms of ecological process, the demographic structure of fragmented populations of D. jueirana-facao followed a reverse J-shaped size class distribution, with more than 45% of plants found in small diameter classes. While a more in-depth understanding of ecological and evolutionary processes at fine-scale is still needed to safeguard this unique plant species, our infant study plays a crucial role to help keep the evolutionary potential of D. jueirana-facao. We stress that the approach used here would be useful to guide conservation and management efforts for species on the brink of extinction.

Matching journals

The top 6 journals account for 50% of the predicted probability mass.

1
PLOS ONE
4510 papers in training set
Top 13%
14.6%
2
PLANTS, PEOPLE, PLANET
21 papers in training set
Top 0.1%
10.2%
3
Frontiers in Plant Science
240 papers in training set
Top 1%
7.3%
4
PeerJ
261 papers in training set
Top 0.4%
6.9%
5
Global Ecology and Conservation
25 papers in training set
Top 0.1%
6.5%
6
Scientific Reports
3102 papers in training set
Top 23%
4.9%
50% of probability mass above
7
Biodiversity and Conservation
11 papers in training set
Top 0.1%
4.4%
8
Biological Conservation
43 papers in training set
Top 0.2%
4.4%
9
Molecular Ecology
304 papers in training set
Top 1%
4.0%
10
Ecology and Evolution
232 papers in training set
Top 1%
3.1%
11
Evolutionary Applications
91 papers in training set
Top 0.4%
2.1%
12
Peer Community Journal
254 papers in training set
Top 2%
1.7%
13
Conservation Genetics
15 papers in training set
Top 0.1%
1.7%
14
Biotropica
15 papers in training set
Top 0.2%
1.5%
15
New Phytologist
309 papers in training set
Top 3%
1.5%
16
Global Change Biology
69 papers in training set
Top 1%
1.2%
17
Annals of Botany
43 papers in training set
Top 0.3%
1.0%
18
eLife
5422 papers in training set
Top 51%
1.0%
19
Genes
126 papers in training set
Top 2%
0.9%
20
Forest Ecology and Management
25 papers in training set
Top 0.4%
0.8%
21
Conservation Biology
14 papers in training set
Top 0.3%
0.8%
22
Heredity
53 papers in training set
Top 0.2%
0.8%
23
Plants
39 papers in training set
Top 2%
0.8%
24
Gene
41 papers in training set
Top 2%
0.8%
25
American Journal of Botany
41 papers in training set
Top 0.3%
0.7%
26
Biological Invasions
14 papers in training set
Top 0.1%
0.7%
27
Diversity and Distributions
26 papers in training set
Top 0.4%
0.7%
28
Journal of Clinical Medicine
91 papers in training set
Top 7%
0.7%
29
Journal of Applied Ecology
35 papers in training set
Top 0.9%
0.5%
30
Frontiers in Genetics
197 papers in training set
Top 12%
0.5%