Cell-based simulations of Notch-dependent cell differentiation on growing domains
Stopka, A.; Boareto, M.; Iber, D.
Show abstract
Notch signalling controls cell differentiation and proliferation in many tissues. The Notch signal is generated by the interaction between the Notch receptor of one cell with the Notch ligand (Delta or Jagged) of a neighbouring cell. Therefore, the pathway requires cell-cell contact in order to be active. During organ development, cell differentiation occurs concurrently with tissue growth and changes in cell morphology. How growth impacts on Notch signalling and cell differentiation remains poorly understood. Here, we developed a modelling environment to simulate Notch signalling in a growing tissue. We use our model to simulate the differentiation process of pancreatic progenitor cells. Our results suggest that Notch-mediated differentiation in the developing pancreas is first mediated by geometric effects that result in loss of Notch signalling on the tissue boundary, leading to the differentiation of tip versus trunk cells. A second wave of differentiation further happens in the trunk cells due to a reduction in the expression of the ligand Jagged, which has been shown to be controlled by signalling factors secreted from the surrounding mesenchyme. Our results bring new insights into how cells coordinate tissue growth with cell fate specification during organ development.
Matching journals
The top 4 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Deciphering and modelling the TGF-β signalling interplays specifying the dorsal-ventral axis of the sea urchin embryo. 96%
- Patterning on the move: the effects of Hh morphogen source movement on signaling dynamics 95%
- FGF2 modulates simultaneously the mode, the rate of division and the growth fraction in cultures of Radial Glia 94%
Similar papers in this journal
- Quantifying cell transitions in C. elegans with data-fitted landscape models 95%
- Mechanical Feedback and Robustness of Apical Constrictions in Drosophila Embryo Ventral Furrow Formation 95%
- Whole animal modelling reveals neuronal mechanisms of decision-making and reproduces unpredictable swimming in frog tadpoles 94%
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.