Back

Automated analysis of sleep in adult C. elegans with closed-loop assessment of state-dependent neural activity

Lawler, D. E.; Chew, Y. L.; Hawk, J. D.; Aljobeh, A.; Schafer, W.; Albrecht, D. R.

2019-10-03 neuroscience
10.1101/791764 bioRxiv
Show abstract

Sleep, a state of quiescence associated with growth and restorative processes, is conserved across species. Invertebrates including the nematode Caenorhabditis elegans exhibit sleep-like states during development and periods of satiety and stress. Here we describe two methods to study behavior and associated neural activity during sleep and awake states in adult C. elegans. A large microfluidic device facilitates population-wide assessment of long-term sleep behavior over 12 h, including effects of fluid flow, oxygen, feeding, odors, and genetic perturbations. Smaller devices allow simultaneous recording of sleep behavior and neuronal activity, and a closed-loop sleep detection system delivers chemical stimuli to individual animals to assess sleep-dependent changes to neural responses. Sleep increased the arousal threshold to aversive chemical stimulation, yet sensory neuron (ASH) and first-layer interneuron (AIB) responses were unchanged. This localizes adult sleep-dependent neuromodulation within interneurons presynaptic to the AVA premotor interneurons, rather than afferent sensory circuits.

Matching journals

The top 5 journals account for 50% of the predicted probability mass.

1
eneuro
389 papers in training set
Top 0.1%
22.8%
2
Nature Communications
4913 papers in training set
Top 17%
10.2%
3
Scientific Reports
3102 papers in training set
Top 16%
6.5%
4
iScience
1063 papers in training set
Top 1%
6.4%
5
Communications Biology
886 papers in training set
Top 0.8%
4.4%
50% of probability mass above
6
eLife
5422 papers in training set
Top 22%
4.0%
7
Lab on a Chip
88 papers in training set
Top 0.3%
4.0%
8
Journal of Neurogenetics
11 papers in training set
Top 0.1%
3.3%
9
BMC Biology
248 papers in training set
Top 0.5%
2.6%
10
PLOS Biology
408 papers in training set
Top 5%
2.6%
11
npj Parkinson's Disease
89 papers in training set
Top 0.6%
2.1%
12
Current Biology
596 papers in training set
Top 8%
2.1%
13
Advanced Science
249 papers in training set
Top 9%
1.9%
14
Cell Reports Methods
141 papers in training set
Top 2%
1.9%
15
Cell Reports
1338 papers in training set
Top 24%
1.7%
16
PLOS ONE
4510 papers in training set
Top 59%
1.2%
17
Science Advances
1098 papers in training set
Top 24%
1.1%
18
PLOS Computational Biology
1633 papers in training set
Top 21%
1.0%
19
The Journal of Neuroscience
928 papers in training set
Top 7%
1.0%
20
Journal of Neuroscience Methods
106 papers in training set
Top 1%
0.8%
21
Proceedings of the National Academy of Sciences
2130 papers in training set
Top 43%
0.8%
22
Frontiers in Behavioral Neuroscience
46 papers in training set
Top 0.9%
0.8%
23
Disease Models & Mechanisms
119 papers in training set
Top 3%
0.8%
24
The FASEB Journal
175 papers in training set
Top 3%
0.7%
25
PLOS Genetics
756 papers in training set
Top 15%
0.7%
26
Frontiers in Cell and Developmental Biology
218 papers in training set
Top 12%
0.5%
27
Frontiers in Molecular Neuroscience
43 papers in training set
Top 1%
0.5%
28
Frontiers in Neuroscience
223 papers in training set
Top 9%
0.5%
29
Journal of Experimental Biology
249 papers in training set
Top 3%
0.5%