A Consensus Framework Unifies Multi-Drug Synergy Metrics
Wooten, D. J.; Meyer, C. T.; Quaranta, V.; Lopez, C. F.
Show abstract
Drug combination discovery depends on reliable synergy metrics; however, no consensus exists on the appropriate synergy model to prioritize lead candidates. The fragmented state of the field confounds analysis, reproducibility, and clinical translation of combinations. Here we present a mass-action based formalism to accurately measure the synergy of drug combinations. In this work, we clarify the relationship between the dominant drug synergy principles and show how biases emerge due to intrinsic assumptions which hinder their broad applicability. We further present a mapping of commonly used frameworks onto a unified synergy landscape, which identifies fundamental issues impacting the interpretation of synergy in discovery efforts. Specifically, we infer how traditional metrics mask consequential synergistic interactions, and contain biases dependent on the Hill-slope and maximal effect of single-drugs. We show how these biases systematically impact the classification of synergy in large combination screens misleading discovery efforts. The proposed approach has potential to accelerate the translatability and reproducibility of drug-synergy studies, by bridging the gap between the curative potential of drug mixtures and the complexity in their study.
Matching journals
The top 3 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Death by a Thousand Cuts -- Combining Kinase Inhibitors for Selective Target Inhibition and Rational Polypharmacology 95%
- Pathway activation model for personalized prediction of drug synergy 94%
- Multi-step vs. single-step resistance evolution under different drugs, pharmacokinetics and treatment regimens 93%
Similar papers in this journal
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.