A theoretical model of neural maturation during the spinal cord neurogenesis
Joshi, P.; Skromne, I.
Show abstract
Cellular differentiation is a tightly regulated process under the control of intricate signaling and transcription factors interaction network working in coordination. These interactions make the systems dynamic, robust and stable but also difficult to dissect. In the spinal cord, recent work has shown that a network of FGF, WNT and Retinoic Acid (RA) signaling factors regulate neural maturation by directing the activity of a transcription factor network that contains CDX at its core. Here we have used partial and ordinary (Hill) differential equation based models to understand the spatiotemporal dynamics of the FGF/WNT/RA and the CDX/transcription factor networks, alone and in combination. We show that in both networks, the strength of interaction among network partners impacts the dynamics, behavior and output of the system. In the signaling network, interaction strength determine the position and size of discrete regions of cell differentiation and small changes in the strength of the interactions among networking partners can result in a signal overriding, balancing or oscillating with another signal. We also show that the spatiotemporal information generated by the signaling network can be conveyed to the CDX/transcription network to produces a transition zone that separates regions of high cell potency from regions of cell differentiation, in agreement with most in vivo observations. Importantly, both networks have built in robustness to extrinsic disturbances. This analysis provides a model for the interaction conditions underlying spinal cord cell maturation during embryonic axial elongation.
Matching journals
The top 6 journals account for 50% of the predicted probability mass.
Similar papers in this journal
- Data-driven modeling predicts gene regulatory network dynamics during the differentiation of multipotential progenitors 95%
- Interkinetic nuclear movements promote apical expansion in pseudostratified epithelia at the expense of apicobasal elongation 94%
- Elucidating multi-input processing 3-node gene regulatory network topologies capable of generating striped gene expression patterns 94%
Similar papers in this journal
- aiMeRA: A generic modular response analysis R package and its application to estrogen and retinoic acid receptors crosstalk 94%
- A Quantitative Model of Cellular Decision Making in Direct Neuronal Reprogramming 94%
- Polarity and mixed-mode oscillations may underlie different patterns of cellular migration 94%
Similar papers in this journal
- Neural tube patterning: from a minimal model for rostrocaudal patterning towards an integrated 3D model 95%
- Subtle alteration in transcriptional memory governs the lineage-level cell cycle duration heterogeneities of mammalian cells 93%
- Multistage feedback driven compartmental dynamics of hematopoiesis 92%
Similar papers in this journal
- Biological data questions the support of the self inhibition required for pattern generation in the half center model. 94%
- Computational modelling unveils how epiblast remodelling and positioning rely on trophectoderm morphogenesis during mouse implantation 94%
- A biochemical mechanism for time-encoding memory formation within individual synapses of Purkinje cells 94%
Similar papers in this journal
"Similar papers" are the closest papers from that journal in the model's embedding space. They show what the match is built on, but the ranking comes mostly from a classifier over the whole training set, not from these examples alone.