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Ddx3x regulates B-cell development and immunoglobulin rearrangement in mice

Liu, K.; Krishnamurthy, D.; Tuazon, J.; Mukhopadhyay, E.; Karmele, E. P.; Donmez, O. A.; Perlot, T.; Foong-Sobis, M.; Karns, R. A.; Mandal, M.; Reynaud, D.; Kottyan, L. C.; Weirauch, M. T.; Shao, W.-H.; Scofield, R. H.; Penninger, J. M.; Harley, J. B.; Waggoner, S. N.

2025-11-28 immunology
10.1101/452086 bioRxiv
Show abstract

The X chromosome gene, DDX3X, is an ATP-dependent RNA helicase with roles in transcription, splicing, nuclear export, and translation. Loss of function mutations in DDX3X are linked to a variety of neoplasms, including B-cell lymphoma. We find that conditional homozygous deletion (Mb1-Cre) of Ddx3x in developing mouse B cells in female mice results in a complete absence of mature peripheral B cells associated with an absolute block at the pro-B cell stage of development in the bone marrow. In male mice with Vav1-Cre or Mb1-Cre mediated hemizygous deletion of Ddx3x, there are less severe reductions in peripheral B-cell frequencies with skewing towards the marginal zone lineage, suggesting that the Y chromosome homolog Ddx3y or other male factors may partially compensate for loss of Ddx3x. Loss of Ddx3x in male mice is associated with perturbations at developmental time points linked to cell cycle arrest and immunoglobulin chain rearrangement. Mechanistically, loss of Ddx3x in pre-B cells is associated with reduced expression of the histone reader Brwd1, failure to curtail proliferation, and defective Igk rearrangement, which skews the peripheral B cell receptor repertoire toward lambda light chain usage. These data reveal that Ddx3x plays an essential role in B-cell development by supporting proliferative and epigenetic changes necessary for rearrangement of immunoglobulin genes.

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